RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PYM1Q9BRP8 204 aaKnown RBP22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 TMX2Q9Y320 296 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 EDIL3O43854 480 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 TXLNAP40222 546 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 GMPSP49915 693 aaPredicted RBP22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 MAP3K10Q02779 954 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 IKQ13123 557 aaPredicted RBP22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 MORC3Q14149 939 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 RASA3Q14644 834 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 GJA3Q9Y6H8 435 aa22.5■■□□□ 1.19
PDLIM5-205ENST00000380180 IKBKBO14920 756 aa22.49■■□□□ 1.19
PDLIM5-205ENST00000380180 CAP2P40123 477 aa22.49■■□□□ 1.19
PDLIM5-205ENST00000380180 SNAP25P60880 206 aa22.49■■□□□ 1.19
PDLIM5-205ENST00000380180 ORC2Q13416 577 aaPredicted RBP22.49■■□□□ 1.19
PDLIM5-205ENST00000380180 SYDE2Q5VT97 1194 aa22.49■■□□□ 1.19
PDLIM5-205ENST00000380180 ZNF830Q96NB3 372 aaPredicted RBP22.49■■□□□ 1.19
PDLIM5-205ENST00000380180 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.49■■□□□ 1.19
PDLIM5-205ENST00000380180 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.49■■□□□ 1.192e-8■■■■□ 25.8
PDLIM5-205ENST00000380180 PP2D1A8MPX8 630 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 SMC2O95347 1197 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 CASP1P29466 404 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 KARSQ15046 597 aaKnown RBP22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 KIAA1755Q5JYT7 1200 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 PDXDC2PQ6P474 469 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 BTNL9Q6UXG8 535 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 SAMD7Q7Z3H4 446 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 MICALL2Q8IY33 904 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 TRIML1Q8N9V2 468 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 DPF2Q92785 391 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 CNOT7Q9UIV1 285 aaKnown RBP22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 CLCN1P35523 988 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 DRC7Q8IY82 874 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 STAMQ92783 540 aa22.48■■□□□ 1.19
PDLIM5-205ENST00000380180 DPYDQ12882 1025 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 AMNQ9BXJ7 453 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 CCSER1Q9C0I3 900 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 GOPCQ9HD26 462 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 GOLGA6L6A8MZA4 724 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L15C9J2P7 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L13C9JLJ4 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L11C9JVI0 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L18D6R9N7 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L22D6RA61 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L17D6RBQ6 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L19D6RCP7 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L20D6RJB6 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 UBA7P41226 1012 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L24Q0WX57 530 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 USP17L6PQ6QN14 398 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 MLKLQ8NB16 471 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 TEPSINQ96N21 525 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 MTRQ99707 1265 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 GLT8D2Q9H1C3 349 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 DISC1Q9NRI5 854 aa22.47■■□□□ 1.19
PDLIM5-205ENST00000380180 TDP2O95551 362 aa22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 TPM4P67936 248 aa22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 TNFAIP1Q13829 316 aa22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 TBC1D10BQ4KMP7 808 aaPredicted RBP22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 FBXO11Q86XK2 927 aa22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 MRFAP1L1Q96HT8 127 aa22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 TTC12Q9H892 705 aaPredicted RBP22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 DICER1Q9UPY3 1922 aaKnown RBP22.46■■□□□ 1.19
PDLIM5-205ENST00000380180 CDC25BP30305 580 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 STAT6P42226 847 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 TECP42680 631 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 MYL5Q02045 173 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 AK8Q96MA6 479 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 GSDMAQ96QA5 445 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 MTMR9Q96QG7 549 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 HSD3B7Q9H2F3 369 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 PRR12Q9ULL5 1215 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 ASTN2O75129 1339 aaPredicted RBP22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 SLC37A4O43826 429 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 STAT2P52630 851 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 CALCRLQ16602 461 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 UTRNP46939 3433 aa22.45■■□□□ 1.18
PDLIM5-205ENST00000380180 PHF20L1A8MW92 1017 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 ASNSP08243 561 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 LMOD1P29536 600 aaPredicted RBP22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 USH1GQ495M9 461 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 FAM83BQ5T0W9 1011 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 RRAGBQ5VZM2 374 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 PPP4R3AQ6IN85 833 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 RASSF8Q8NHQ8 419 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 BLZF1Q9H2G9 400 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 NRBP1Q9UHY1 535 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 ZNF541Q9H0D2 1346 aa22.44■■□□□ 1.18
PDLIM5-205ENST00000380180 TXKP42681 527 aa22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 NAALADL2Q58DX5 795 aa22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 GLIS2Q9BZE0 524 aaPredicted RBP22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 VCPKMTQ9H867 229 aa22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 DACH1Q9UI36 760 aa22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 HACL1Q9UJ83 578 aa22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 MEIS2O14770 477 aa22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 TPM3P06753 285 aa22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 ZYXQ15942 572 aaKnown RBP22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 CCDC84Q86UT8 332 aaPredicted RBP22.43■■□□□ 1.18
PDLIM5-205ENST00000380180 SBF1O95248 1867 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms