RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 HOMER1Q86YM7 354 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 TRERF1Q96PN7 1200 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 MMP19Q99542 508 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 MAF1Q9H063 256 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 RNF146Q9NTX7 359 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 SLC5A4Q9NY91 659 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 RBM27Q9P2N5 1060 aaKnown RBP13.81□□□□□ -0.2
PCNA-201ENST00000379143 RIPK3Q9Y572 518 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 ZSWIM8A7E2V4 1837 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 ZNF236Q9UL36 1845 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 ABCB11O95342 1321 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 PLXNB2O15031 1838 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 CDC27P30260 824 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
PCNA-201ENST00000379143 RGS2P41220 211 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 CAP1Q01518 475 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 PRKCZQ05513 592 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 IRF5Q13568 498 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 MORN1Q5T089 497 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 FBXO46Q6PJ61 603 aaPredicted RBP13.8□□□□□ -0.2
PCNA-201ENST00000379143 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 RAET1EQ8TD07 263 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 PIGSQ96S52 555 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
PCNA-201ENST00000379143 HOMER2Q9NSB8 354 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
PCNA-201ENST00000379143 GJD2Q9UKL4 321 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 TPCN1Q9ULQ1 816 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 MYH6P13533 1939 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 PFASO15067 1338 aa13.8□□□□□ -0.2
PCNA-201ENST00000379143 MKI67P46013 3256 aaKnown RBP13.79□□□□□ -0.2
PCNA-201ENST00000379143 CPLX1O14810 134 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 CDKL5O76039 1030 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
PCNA-201ENST00000379143 IFNAR1P17181 557 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 ADORA2AP29274 412 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 MCM2P49736 904 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 FLT3LGP49771 235 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 CCT2P78371 535 aaKnown RBP13.79□□□□□ -0.2
PCNA-201ENST00000379143 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 USH1GQ495M9 461 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 TRMT44Q8IYL2 757 aaKnown RBP13.79□□□□□ -0.2
PCNA-201ENST00000379143 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
PCNA-201ENST00000379143 CCDC82Q8N4S0 544 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
PCNA-201ENST00000379143 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
PCNA-201ENST00000379143 PCDHA1Q9Y5I3 950 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 HTTP42858 3142 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
PCNA-201ENST00000379143 hCG_1984214I3L0E3 225 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 PFKFB2O60825 505 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 HOXC6P09630 235 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 AKAP17AQ02040 695 aaKnown RBP13.78□□□□□ -0.2
PCNA-201ENST00000379143 FUT2Q10981 343 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 STK3Q13188 491 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 MCF2L2Q86YR7 1114 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 SAMD3Q8N6K7 520 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 ZNF713Q8N859 430 aaPredicted RBP13.78□□□□□ -0.2
PCNA-201ENST00000379143 RGS22Q8NE09 1264 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 USP6NLQ92738 828 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 ZSCAN31Q96LW9 406 aaPredicted RBP13.78□□□□□ -0.2
PCNA-201ENST00000379143 APBA2Q99767 749 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 RNF26Q9BY78 433 aaPredicted RBP13.78□□□□□ -0.2
PCNA-201ENST00000379143 GABRQQ9UN88 632 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
PCNA-201ENST00000379143 CENPFP49454 3210 aa13.78□□□□□ -0.2
PCNA-201ENST00000379143 NTRK3Q16288 839 aa13.77□□□□□ -0.21
PCNA-201ENST00000379143 TRIM22Q8IYM9 498 aa13.77□□□□□ -0.21
PCNA-201ENST00000379143 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
PCNA-201ENST00000379143 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.21
PCNA-201ENST00000379143 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.21
PCNA-201ENST00000379143 MAP3K20Q9NYL2 800 aaKnown RBP13.77□□□□□ -0.21
PCNA-201ENST00000379143 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
PCNA-201ENST00000379143 PRPF3O43395 683 aaKnown RBP13.76□□□□□ -0.21
PCNA-201ENST00000379143 PPP1R11O60927 126 aaPredicted RBP13.76□□□□□ -0.21
PCNA-201ENST00000379143 CYP2B6P20813 491 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 SCRN1Q12765 414 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 ME3Q16798 604 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 NOL8Q76FK4 1167 aaKnown RBP13.76□□□□□ -0.21
PCNA-201ENST00000379143 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 GTF3C6Q969F1 213 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 A1CFQ9NQ94 594 aaKnown RBP13.76□□□□□ -0.21
PCNA-201ENST00000379143 SH2B1Q9NRF2 756 aaPredicted RBP13.76□□□□□ -0.21
PCNA-201ENST00000379143 CYP39A1Q9NYL5 469 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 PTCH2Q9Y6C5 1203 aa13.76□□□□□ -0.21
PCNA-201ENST00000379143 V9GY48 417 aaPredicted RBP13.76□□□□□ -0.21
PCNA-201ENST00000379143 DNAJC25-GNG10A0A024R161 153 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 NFIBO00712 420 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 ADCY3O60266 1144 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 GRK4P32298 578 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 SSRP1Q08945 709 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms