RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 TMEM232C9JQI7 657 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 H0YGN5 161 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 CD2BP2O95400 341 aaKnown RBP16.04■□□□□ 0.16
UPK1A-202ENST00000379013 TFRCP02786 760 aaKnown RBP16.04■□□□□ 0.16
UPK1A-202ENST00000379013 IFNAR1P17181 557 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 SSRP1Q08945 709 aaKnown RBP16.04■□□□□ 0.16
UPK1A-202ENST00000379013 SCRN1Q12765 414 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 BTNL9Q6UXG8 535 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 CCDC144CPQ8IYA2 1237 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 RRP36Q96EU6 259 aaKnown RBP16.04■□□□□ 0.16
UPK1A-202ENST00000379013 SLF1Q9BQI6 1058 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
UPK1A-202ENST00000379013 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
UPK1A-202ENST00000379013 FRMPD2Q68DX3 1309 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-202ENST00000379013 hCG_1984214I3L0E3 225 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 COBLO75128 1261 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 FLOT1O75955 427 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 XBP1P17861 261 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 RXRAP19793 462 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-202ENST00000379013 MAP2K5Q13163 448 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 CUL4AQ13619 759 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 TMEM132BQ14DG7 1078 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 SYDE2Q5VT97 1194 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-202ENST00000379013 KCTD1Q719H9 257 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 CCDC83Q8IWF9 413 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 FAM177A1Q8N128 213 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-202ENST00000379013 ZNF713Q8N859 430 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-202ENST00000379013 MB21D1Q8N884 522 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
UPK1A-202ENST00000379013 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 GPCPD1Q9NPB8 672 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 PCDH10Q9P2E7 1040 aa16.03■□□□□ 0.16
UPK1A-202ENST00000379013 COL11A1P12107 1806 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-202ENST00000379013 RPTORQ8N122 1335 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.16
UPK1A-202ENST00000379013 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
UPK1A-202ENST00000379013 ERCC3P19447 782 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 GRB14Q14449 540 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 WDR78Q5VTH9 848 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 LHX8Q68G74 356 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 TRPV1Q8NER1 839 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 REPS2Q8NFH8 660 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 CCDC12Q8WUD4 166 aaPredicted RBP16.02■□□□□ 0.16
UPK1A-202ENST00000379013 SOCS4Q8WXH5 440 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 PAWRQ96IZ0 340 aaKnown RBP16.02■□□□□ 0.16
UPK1A-202ENST00000379013 SMC3Q9UQE7 1217 aa16.02■□□□□ 0.16
UPK1A-202ENST00000379013 A0A0G2JMZ2 1700 aa16.02■□□□□ 0.15
UPK1A-202ENST00000379013 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 ZBED4O75132 1171 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 FARP2O94887 1054 aaPredicted RBP16.01■□□□□ 0.15
UPK1A-202ENST00000379013 DEXIO95424 95 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 LARGE1O95461 756 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 GOLGA8HP0CJ92 632 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 PDCP20941 246 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 CDC27P30260 824 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 ADD1P35611 737 aaKnown RBP16.01■□□□□ 0.15
UPK1A-202ENST00000379013 RGS2P41220 211 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 CCAR1Q8IX12 1150 aaKnown RBP16.01■□□□□ 0.15
UPK1A-202ENST00000379013 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 RIOX1Q9H6W3 641 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
UPK1A-202ENST00000379013 HMX1Q9NP08 348 aaPredicted RBP16.01■□□□□ 0.15
UPK1A-202ENST00000379013 PPP1R9AQ9ULJ8 1098 aa16.01■□□□□ 0.15
UPK1A-202ENST00000379013 LAMA2P24043 3122 aaKnown RBP16.01■□□□□ 0.15
UPK1A-202ENST00000379013 CNTNAP5Q8WYK1 1306 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
UPK1A-202ENST00000379013 HOXC6P09630 235 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 CYP2C19P33261 490 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 COPB2P35606 906 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 OAZ1P54368 228 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 STAG2Q8N3U4 1231 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 RGS22Q8NE09 1264 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 KIFC2Q96AC6 838 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
UPK1A-202ENST00000379013 CWC22Q9HCG8 908 aaKnown RBP16■□□□□ 0.15
UPK1A-202ENST00000379013 PNMA6FA0A0J9YX94 578 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 VWA5AO00534 786 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 ZBTB5O15062 677 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 PLEKHA8P1O95397 391 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 ADORA2AP29274 412 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 CCNA1P78396 465 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 TRIM29Q14134 588 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 TEX2Q8IWB9 1127 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 ADGRF4Q8IZF3 695 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 SRBD1Q8N5C6 995 aaKnown RBP15.99■□□□□ 0.15
UPK1A-202ENST00000379013 NSUN7Q8NE18 718 aaKnown RBP15.99■□□□□ 0.15
UPK1A-202ENST00000379013 CCDC148Q8NFR7 591 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 DPF3Q92784 378 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 APBA2Q99767 749 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 FAM217BQ9NTX9 383 aaPredicted RBP15.99■□□□□ 0.15
UPK1A-202ENST00000379013 ORC3Q9UBD5 711 aaPredicted RBP15.99■□□□□ 0.15
UPK1A-202ENST00000379013 OGDHLQ9ULD0 1010 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 PRR12Q9ULL5 1215 aa15.99■□□□□ 0.15
UPK1A-202ENST00000379013 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms