RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 DPCR1Q3MIW9 517 aa22.02■■□□□ 1.11
SSU72-204ENST00000378726 ISM2Q6H9L7 571 aa22.02■■□□□ 1.11
SSU72-204ENST00000378726 PPP1R18Q6NYC8 613 aa22.02■■□□□ 1.11
SSU72-204ENST00000378726 SAMD7Q7Z3H4 446 aa22.02■■□□□ 1.11
SSU72-204ENST00000378726 MICALL2Q8IY33 904 aa22.02■■□□□ 1.11
SSU72-204ENST00000378726 ARHGEF10LQ9HCE6 1279 aa22.02■■□□□ 1.11
SSU72-204ENST00000378726 GOLGA6L19H0YKK7 550 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 TNNT1P13805 278 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 ECE1P42892 770 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 LETM2Q2VYF4 491 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 KANK3Q6NY19 840 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 TBCKQ8TEA7 893 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 DHX58Q96C10 678 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 TMEM60Q9H2L4 133 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 RIC8AQ9NPQ8 531 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 ZBTB21Q9ULJ3 1066 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 PCDHA5Q9Y5H7 936 aa22.01■■□□□ 1.11
SSU72-204ENST00000378726 A0A087X0B3 334 aa22■■□□□ 1.11
SSU72-204ENST00000378726 BECN2A8MW95 431 aa22■■□□□ 1.11
SSU72-204ENST00000378726 ACTN4O43707 911 aaKnown RBP22■■□□□ 1.11
SSU72-204ENST00000378726 BMP3P12645 472 aa22■■□□□ 1.11
SSU72-204ENST00000378726 QRICH1Q2TAL8 776 aa22■■□□□ 1.11
SSU72-204ENST00000378726 DTHD1Q6ZMT9 781 aa22■■□□□ 1.11
SSU72-204ENST00000378726 NEK8Q86SG6 692 aa22■■□□□ 1.11
SSU72-204ENST00000378726 ACER1Q8TDN7 264 aa22■■□□□ 1.11
SSU72-204ENST00000378726 SYNPO2Q9UMS6 1093 aa22■■□□□ 1.11
SSU72-204ENST00000378726 TMEM232C9JQI7 657 aa22■■□□□ 1.11
SSU72-204ENST00000378726 CCNT1O60563 726 aaKnown RBP22■■□□□ 1.11
SSU72-204ENST00000378726 CAP2P40123 477 aa22■■□□□ 1.11
SSU72-204ENST00000378726 MAP3K10Q02779 954 aa22■■□□□ 1.11
SSU72-204ENST00000378726 ARID5BQ14865 1188 aa22■■□□□ 1.11
SSU72-204ENST00000378726 POSTNQ15063 836 aa22■■□□□ 1.11
SSU72-204ENST00000378726 TMX2Q9Y320 296 aa22■■□□□ 1.11
SSU72-204ENST00000378726 LONP1P36776 959 aaKnown RBP21.99■■□□□ 1.11
SSU72-204ENST00000378726 MRPL12P52815 198 aaKnown RBP21.99■■□□□ 1.11
SSU72-204ENST00000378726 IKQ13123 557 aaPredicted RBP21.99■■□□□ 1.11
SSU72-204ENST00000378726 TBC1D10BQ4KMP7 808 aaPredicted RBP21.99■■□□□ 1.11
SSU72-204ENST00000378726 SARM1Q6SZW1 724 aa21.99■■□□□ 1.11
SSU72-204ENST00000378726 SPICE1Q8N0Z3 855 aa21.99■■□□□ 1.11
SSU72-204ENST00000378726 SMTNL1A8MU46 457 aa21.99■■□□□ 1.11
SSU72-204ENST00000378726 TNFAIP1Q13829 316 aa21.99■■□□□ 1.11
SSU72-204ENST00000378726 CDC37Q16543 378 aaPredicted RBP21.99■■□□□ 1.11
SSU72-204ENST00000378726 DHX40Q8IX18 779 aaKnown RBP21.99■■□□□ 1.11
SSU72-204ENST00000378726 CUL5Q93034 780 aa21.99■■□□□ 1.11
SSU72-204ENST00000378726 PSTPIP2Q9H939 334 aa21.99■■□□□ 1.11
SSU72-204ENST00000378726 LAD1O00515 517 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 SLFN14P0C7P3 912 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 TPD52L1Q16890 204 aaPredicted RBP21.98■■□□□ 1.11
SSU72-204ENST00000378726 PCDHA1Q9Y5I3 950 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 SPDYE4A6NLX3 237 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 ZSCAN20P17040 1043 aaPredicted RBP21.98■■□□□ 1.11
SSU72-204ENST00000378726 NCBP1Q09161 790 aaKnown RBP21.98■■□□□ 1.11
SSU72-204ENST00000378726 LRRC8AQ8IWT6 810 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 GRAMD1CQ8IYS0 662 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 CCDC34Q96HJ3 373 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 SPON1Q9HCB6 807 aa21.98■■□□□ 1.11
SSU72-204ENST00000378726 UBE2SQ16763 222 aa21.97■■□□□ 1.11
SSU72-204ENST00000378726 SYDE2Q5VT97 1194 aa21.97■■□□□ 1.11
SSU72-204ENST00000378726 SNAP25P60880 206 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 BTNL9Q6UXG8 535 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 ARHGAP27Q6ZUM4 889 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 AOPEPQ8N6M6 819 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 MRFAP1L1Q96HT8 127 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 TEPSINQ96N21 525 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 BPIFA3Q9BQP9 254 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 GOPCQ9HD26 462 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.96■■□□□ 1.11
SSU72-204ENST00000378726 PRR29P0C7W0 189 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 CDC25AP30304 524 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 PRPHP41219 470 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 CLK2P49760 499 aaKnown RBP21.96■■□□□ 1.11
SSU72-204ENST00000378726 KIAA1755Q5JYT7 1200 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 IQUBQ8NA54 791 aa21.96■■□□□ 1.11
SSU72-204ENST00000378726 ASTN2O75129 1339 aaPredicted RBP21.96■■□□□ 1.11
SSU72-204ENST00000378726 PAGE5Q96GU1 130 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 HACL1Q9UJ83 578 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 ZNF541Q9H0D2 1346 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 USP27XA6NNY8 438 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 NEMFO60524 1076 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 AFMP43652 599 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 SARSP49591 514 aaKnown RBP21.95■■□□□ 1.1
SSU72-204ENST00000378726 UTP14CQ5TAP6 766 aaKnown RBP21.95■■□□□ 1.1
SSU72-204ENST00000378726 NT5DC1Q5TFE4 455 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 SMARCE1Q969G3 411 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 PYM1Q9BRP8 204 aaKnown RBP21.95■■□□□ 1.1
SSU72-204ENST00000378726 AMNQ9BXJ7 453 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 GLT8D2Q9H1C3 349 aa21.95■■□□□ 1.1
SSU72-204ENST00000378726 PHF20L1A8MW92 1017 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 ASNSP08243 561 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 OR52Z1P0C646 297 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 DMTNQ08495 405 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 ORC2Q13416 577 aaPredicted RBP21.94■■□□□ 1.1
SSU72-204ENST00000378726 NAA30Q147X3 362 aaPredicted RBP21.94■■□□□ 1.1
SSU72-204ENST00000378726 KIF4BQ2VIQ3 1234 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 SH3RF1Q7Z6J0 888 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 H7C1D1 291 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 EDIL3O43854 480 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 TXLNAP40222 546 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 FBXO11Q86XK2 927 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 DEFB129Q9H1M3 183 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms