RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 PARD6BQ9BYG5 372 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 ZBTB22O15209 634 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 PPP6R2O75170 966 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 ZMYM1Q5SVZ6 1142 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 NRKQ7Z2Y5 1582 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 KCNK3O14649 394 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 SLFN14P0C7P3 912 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 ARHGEF10LQ9HCE6 1279 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 LTKP29376 864 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 ATICP31939 592 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 STX2P32856 288 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 ITIH3Q06033 890 aa15.91■□□□□ 0.14
PRDM16-203ENST00000378391 ZKSCAN8Q15776 578 aaPredicted RBP15.91■□□□□ 0.14
PRDM16-203ENST00000378391 RBM17Q96I25 401 aaKnown RBP15.91■□□□□ 0.14
PRDM16-203ENST00000378391 SMCO2A6NFE2 343 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 KRIT1O00522 736 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 UFL1O94874 794 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 EIF6P56537 245 aaKnown RBP15.9■□□□□ 0.14
PRDM16-203ENST00000378391 GALNT17Q6IS24 598 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 DCUN1D2Q6PH85 259 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 LSM14BQ9BX40 385 aaKnown RBP15.9■□□□□ 0.14
PRDM16-203ENST00000378391 PKD2L1Q9P0L9 805 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 HGSO14964 777 aaPredicted RBP15.9■□□□□ 0.14
PRDM16-203ENST00000378391 SP4Q02446 784 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 STRN3Q13033 797 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 PPP1R21Q6ZMI0 780 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 NYAP1Q6ZVC0 841 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 BTN2A1Q7KYR7 527 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 PHLDB2Q86SQ0 1253 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 RNF10Q8N5U6 811 aaKnown RBP15.9■□□□□ 0.14
PRDM16-203ENST00000378391 P3H4Q92791 437 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 TRPC3Q13507 836 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 E4F1Q66K89 784 aaPredicted RBP15.9■□□□□ 0.14
PRDM16-203ENST00000378391 ZSCAN10Q96SZ4 725 aaPredicted RBP15.9■□□□□ 0.14
PRDM16-203ENST00000378391 BPIFA3Q9BQP9 254 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 ATP8A2Q9NTI2 1148 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 MGEA5O60502 916 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 SNX16P57768 344 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 KLHL14Q9P2G3 628 aa15.9■□□□□ 0.14
PRDM16-203ENST00000378391 I3L4J1 428 aa15.89■□□□□ 0.14
PRDM16-203ENST00000378391 PDE6AP16499 860 aa15.89■□□□□ 0.14
PRDM16-203ENST00000378391 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.14
PRDM16-203ENST00000378391 GPIHBP1Q8IV16 184 aa15.89■□□□□ 0.14
PRDM16-203ENST00000378391 CDCA7Q9BWT1 371 aaPredicted RBP15.89■□□□□ 0.14
PRDM16-203ENST00000378391 USH1CQ9Y6N9 552 aa15.89■□□□□ 0.14
PRDM16-203ENST00000378391 M0R2C6 588 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 CNBD1Q8NA66 436 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
PRDM16-203ENST00000378391 TAF6LQ9Y6J9 622 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 SESN3P58005 492 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 ARMCX3Q9UH62 379 aaPredicted RBP15.89■□□□□ 0.13
PRDM16-203ENST00000378391 USP17L12C9JPN9 530 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 USP17L21D6R901 530 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 LONP1P36776 959 aaKnown RBP15.89■□□□□ 0.13
PRDM16-203ENST00000378391 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
PRDM16-203ENST00000378391 RPN1P04843 607 aaKnown RBP15.89■□□□□ 0.13
PRDM16-203ENST00000378391 HARSP12081 509 aaKnown RBP15.89■□□□□ 0.13
PRDM16-203ENST00000378391 RANBP1P43487 201 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 COPB1P53618 953 aaKnown RBP15.89■□□□□ 0.13
PRDM16-203ENST00000378391 SLC8A3P57103 927 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 RAD51AP2Q09MP3 1159 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 TSGA10IPQ3SY00 556 aa15.89■□□□□ 0.13
PRDM16-203ENST00000378391 IWS1Q96ST2 819 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 TNKSO95271 1327 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 DNAJC8O75937 253 aaPredicted RBP15.88■□□□□ 0.13
PRDM16-203ENST00000378391 GYS2P54840 703 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 MCTP2Q6DN12 878 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 KCNG1Q9UIX4 513 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 PCDHB13Q9Y5F0 798 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 CCDC151A5D8V7 595 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 TROVE2P10155 538 aaKnown RBP eCLIP15.88■□□□□ 0.13
PRDM16-203ENST00000378391 SCG2P13521 617 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 ATP1A2P50993 1020 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 MAGEF1Q9HAY2 307 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 ODF2LQ9ULJ1 636 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 STK10O94804 968 aaKnown RBP15.88■□□□□ 0.13
PRDM16-203ENST00000378391 H2AFZP0C0S5 128 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 SLC8A1P32418 973 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 PTPN12Q05209 780 aaKnown RBP15.88■□□□□ 0.13
PRDM16-203ENST00000378391 H2AFVQ71UI9 128 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 GABPB2Q8TAK5 448 aaPredicted RBP15.88■□□□□ 0.13
PRDM16-203ENST00000378391 EPC1Q9H2F5 836 aa15.88■□□□□ 0.13
PRDM16-203ENST00000378391 KIF1CO43896 1103 aaKnown RBP15.87■□□□□ 0.13
PRDM16-203ENST00000378391 OR52Z1P0C646 297 aa15.87■□□□□ 0.13
PRDM16-203ENST00000378391 CASP14P31944 242 aa15.87■□□□□ 0.13
PRDM16-203ENST00000378391 UBE3CQ15386 1083 aa15.87■□□□□ 0.13
PRDM16-203ENST00000378391 ARHGAP44Q17R89 818 aa15.87■□□□□ 0.13
PRDM16-203ENST00000378391 CC2D1AQ6P1N0 951 aaPredicted RBP15.87■□□□□ 0.13
PRDM16-203ENST00000378391 ZNF513Q8N8E2 541 aaPredicted RBP15.87■□□□□ 0.13
PRDM16-203ENST00000378391 GPHNQ9NQX3 736 aaPredicted RBP15.87■□□□□ 0.13
PRDM16-203ENST00000378391 RRP15Q9Y3B9 282 aaKnown RBP15.87■□□□□ 0.13
PRDM16-203ENST00000378391 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
PRDM16-203ENST00000378391 LRRD1A4D1F6 860 aa15.87■□□□□ 0.13
PRDM16-203ENST00000378391 HIP1RO75146 1068 aa15.87■□□□□ 0.13
PRDM16-203ENST00000378391 FAM47AQ5JRC9 791 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms