RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 EPN1Q9Y6I3 576 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-203ENST00000378169 CEP104O60308 925 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 ATP2C2O75185 946 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 TNNC1P63316 161 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 ADAM9Q13443 819 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 MIER3Q7Z3K6 550 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 SGMS1Q86VZ5 419 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 RSPH14Q9UHP6 348 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 FOXN1O15353 648 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 ACTN2P35609 894 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 SMC1AQ14683 1233 aaKnown RBP14.61□□□□□ -0.07
NPHP4-203ENST00000378169 FAM178BQ8IXR5 827 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 ENOX1Q8TC92 643 aaKnown RBP14.61□□□□□ -0.07
NPHP4-203ENST00000378169 GOLGA6L7A0A1B0GV03 622 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 POLR2FP61218 127 aaKnown RBP14.61□□□□□ -0.07
NPHP4-203ENST00000378169 RBL2Q08999 1139 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 GRIPAP1Q4V328 841 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 HDXQ7Z353 690 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 NLRX1Q86UT6 975 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 KLHL7Q8IXQ5 586 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 CCDC51Q96ER9 411 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 CEP95Q96GE4 821 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 PPP1R13BQ96KQ4 1090 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 IFT74Q96LB3 600 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 ABCB4P21439 1286 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 COA1Q9GZY4 146 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 PI4KBQ9UBF8 816 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 SWAP70Q9UH65 585 aa14.61□□□□□ -0.07
NPHP4-203ENST00000378169 USP17L5A8MUK1 530 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 C21orf2O43822 256 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 ANTXR2P58335 489 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 TUBB4BP68371 445 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 RESP18Q5W5W9 173 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 GSTA5Q7RTV2 222 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 TMC4Q7Z404 712 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 CCPG1Q9ULG6 757 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 USP32Q8NFA0 1604 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 BUB1O43683 1085 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 TNFAIP1Q13829 316 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 CFAP58Q5T655 872 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 MRPL11Q9Y3B7 192 aaKnown RBP14.6□□□□□ -0.07
NPHP4-203ENST00000378169 SAR1BQ9Y6B6 198 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 MYOM1P52179 1685 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 PXDNLA1KZ92 1463 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 FAM205CA6NFA0 338 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 ENC1O14682 589 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 NSUN4Q96CB9 384 aaKnown RBP14.6□□□□□ -0.07
NPHP4-203ENST00000378169 ALDH8A1Q9H2A2 487 aaPredicted RBP14.6□□□□□ -0.07
NPHP4-203ENST00000378169 CTTNBP2NLQ9P2B4 639 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 ARHGEF28Q8N1W1 1705 aaKnown RBP14.6□□□□□ -0.07
NPHP4-203ENST00000378169 MEGF6O75095 1541 aa14.6□□□□□ -0.07
NPHP4-203ENST00000378169 SALL3Q9BXA9 1300 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 NOP56O00567 594 aaKnown RBP14.59□□□□□ -0.07
NPHP4-203ENST00000378169 HOXA13P31271 388 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-203ENST00000378169 SHC4Q6S5L8 630 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 SLFN12Q8IYM2 578 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 PSDA5PKW4 1024 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-203ENST00000378169 TUBBP07437 444 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 BMP3P12645 472 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 NPR1P16066 1061 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 WDR44Q5JSH3 913 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 STAG2Q8N3U4 1231 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 PAGR1Q9BTK6 254 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 TDRD3Q9H7E2 651 aaKnown RBP14.59□□□□□ -0.07
NPHP4-203ENST00000378169 IGDCC4Q8TDY8 1250 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 P2RX5Q93086 422 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 CCDC127Q96BQ5 260 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 GJD4Q96KN9 370 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-203ENST00000378169 DNAJC5Q9H3Z4 198 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 EPB41L4AQ9HCS5 686 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-203ENST00000378169 ABCC12Q96J65 1359 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 OVOS2A0A0G2JMS6 1433 aa14.59□□□□□ -0.07
NPHP4-203ENST00000378169 PP2D1A8MPX8 630 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 OPA1O60313 960 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 CUL4BQ13620 913 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 PFKFB3Q16875 520 aaPredicted RBP14.58□□□□□ -0.07
NPHP4-203ENST00000378169 LINC00116Q8NCU8 138 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 PDLIM2Q96JY6 352 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 AK8Q96MA6 479 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 RASAL2Q9UJF2 1139 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 PXDNQ92626 1479 aa14.58□□□□□ -0.07
NPHP4-203ENST00000378169 LAD1O00515 517 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 GH2P01242 217 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 RXRBP28702 533 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 GPSM2P81274 684 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 ZNF658Q5TYW1 1059 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-203ENST00000378169 LRCH2Q5VUJ6 765 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 CCDC155Q8N6L0 562 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 SOWAHDA6NJG2 315 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 FDPSP14324 419 aaKnown RBP14.58□□□□□ -0.08
NPHP4-203ENST00000378169 CDC25BP30305 580 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-203ENST00000378169 RABEP2Q9H5N1 569 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 POLD4Q9HCU8 107 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 LARSQ9P2J5 1176 aaKnown RBP14.58□□□□□ -0.08
NPHP4-203ENST00000378169 SPATA31A1Q5TZJ5 1347 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 WDR19Q8NEZ3 1342 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 CTDNEP1O95476 244 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 NTSR2O95665 410 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms