RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 TRIM37O94972 964 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 MBD4O95243 580 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-202ENST00000378161 PEX5LQ8IYB4 626 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 MYOCDQ8IZQ8 938 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 CDK5RAP3Q96JB5 506 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 PTPDC1A2A3K4 754 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 SPTLC2O15270 562 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 PDE5AO76074 875 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 SUN1O94901 812 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 PPP1R15BQ5SWA1 713 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 SEC16BQ96JE7 1060 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 PDP2Q9P2J9 529 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 TMA7Q9Y2S6 64 aaKnown RBP12.91□□□□□ -0.34
NPHP4-202ENST00000378161 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 RASSF9O75901 435 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 PHBP35232 272 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 METAP2P50579 478 aaKnown RBP eCLIP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 SSRP1Q08945 709 aaKnown RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 KLC3Q6P597 504 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 CYP26C1Q6V0L0 522 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 GSPT2Q8IYD1 628 aaKnown RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 CTNND1O60716 968 aaKnown RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 KCNA2P16389 499 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 ABL2P42684 1182 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 RCN2Q14257 317 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 KANK3Q6NY19 840 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 DNAJC9Q8WXX5 260 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 DDX23Q9BUQ8 820 aaKnown RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 SNRKQ9NRH2 765 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 IFIT3O14879 490 aaKnown RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 ANKRD20A8PQ5CZ79 823 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 FAAH2Q6GMR7 532 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 WDR93Q6P2C0 686 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 SIX5Q8N196 739 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 KIFAP3Q92845 792 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 DYDC2Q96IM9 177 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
NPHP4-202ENST00000378161 THEGQ9P2T0 379 aa12.9□□□□□ -0.34
NPHP4-202ENST00000378161 A0A087WWV3 80 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 EIF4BP23588 611 aaKnown RBP12.9□□□□□ -0.35
NPHP4-202ENST00000378161 PDE6CP51160 858 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 TRAPPC9Q96Q05 1148 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.35
NPHP4-202ENST00000378161 SLF1Q9BQI6 1058 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 SPZ1Q9BXG8 430 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 MRGBPQ9NV56 204 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 ATP7BP35670 1465 aa12.9□□□□□ -0.35
NPHP4-202ENST00000378161 DTNBO60941 627 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 LDHAP00338 332 aaKnown RBP12.89□□□□□ -0.35
NPHP4-202ENST00000378161 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 MAP3K12Q12852 859 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 LRP2BPQ9P2M1 347 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ZFYVE16Q7Z3T8 1539 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 STARD3NLO95772 234 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 TOGARAM2Q6ZUX3 1019 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 UBE2Q1Q7Z7E8 422 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 MICU3Q86XE3 530 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ELOA2Q8IYF1 753 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-202ENST00000378161 CEP63Q96MT8 703 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ABLIM1O14639 778 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 CTNNA1P35221 906 aaKnown RBP12.89□□□□□ -0.35
NPHP4-202ENST00000378161 MTTPP55157 894 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ELF3P78545 371 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-202ENST00000378161 UBE4AQ14139 1066 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 TTF1Q15361 905 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ANKRD20A2Q5SQ80 823 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ANKRD20A1Q5TYW2 823 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ANKRD20A3Q5VUR7 823 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 ZBTB8BQ8NAP8 495 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-202ENST00000378161 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 MAML3Q96JK9 1138 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 PAG1Q9NWQ8 432 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 SUN2Q9UH99 717 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
NPHP4-202ENST00000378161 MAP3K7O43318 606 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 TRIM65Q6PJ69 517 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 TBC1D5Q92609 795 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 SMC6Q96SB8 1091 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.88□□□□□ -0.35
NPHP4-202ENST00000378161 KLHL14Q9P2G3 628 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 H0Y3Z8 333 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 KRT14P02533 472 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 GUCY2DQ02846 1103 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 P3H1Q32P28 736 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
NPHP4-202ENST00000378161 PPP1R21Q6ZMI0 780 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms