RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 TEKT1Q969V4 418 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 DHRS1Q96LJ7 313 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 MAST2Q6P0Q8 1798 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 SPTBN5Q9NRC6 3674 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 TCP10L2B9ZVM9 353 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 LSM1O15116 133 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 URI1O94763 535 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 SCG2P13521 617 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 RPS6KB1P23443 525 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 CHRNA5P30532 468 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 PLS1Q14651 629 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 ACBD3Q9H3P7 528 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 PRKAB2O43741 272 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 ZRANB2O95218 330 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 MARCKSP29966 332 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 GRAPQ13588 217 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 EAPPQ56P03 285 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CNPY2Q9Y2B0 182 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 NUB1Q9Y5A7 615 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 BIN1O00499 593 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CHUKO15111 745 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 RTN3O95197 1032 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 TFAP4Q01664 338 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 DNM1Q05193 864 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 EZH2Q15910 746 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 KLHL10Q6JEL2 608 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 NYAP1Q6ZVC0 841 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CMTR1Q8N1G2 835 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 NAT10Q9H0A0 1025 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 SPDYE3A6NKU9 549 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 E7EWF7 191 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 EIF4BP23588 611 aaKnown RBP12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 NAPAP54920 295 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CLEC17AQ6ZS10 378 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 FSIP1Q8NA03 581 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 SUPT20HQ8NEM7 779 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CUL5Q93034 780 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 PHKBQ93100 1093 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CARD6Q9BX69 1037 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 ARFGAP3Q9NP61 516 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 STAP2Q9UGK3 403 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 LNPEPQ9UIQ6 1025 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 MINPP1Q9UNW1 487 aa12.05□□□□□ -0.48
PCDHGA1-201ENST00000378105 CPP00450 1065 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 BTDP43251 543 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 DMPKQ09013 629 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 SLC27A3Q5K4L6 730 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 CAPRIN2Q6IMN6 1127 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 NANOGNBQ7Z5D8 188 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 MYO6Q9UM54 1294 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 CCDC192P0DO97 292 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 ZSCAN22P10073 491 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 EHD4Q9H223 541 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 ANGEL1Q9UNK9 670 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 TIAM2Q8IVF5 1701 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 CAMTA2O94983 1202 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 HSPA4P34932 840 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 PRPHP41219 470 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 FAM81AQ8TBF8 368 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 PUS7LQ9H0K6 701 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 RHBDL2Q9NX52 303 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 BZW2Q9Y6E2 419 aaKnown RBP12.04□□□□□ -0.48
PCDHGA1-201ENST00000378105 LRRC10BA6NIK2 292 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 MCAMP43121 646 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 ADCK5Q3MIX3 580 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 FKBP15Q5T1M5 1219 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 RNF187Q5TA31 235 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 OSBP2Q969R2 916 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 MKS1Q9NXB0 559 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 DDX20Q9UHI6 824 aaKnown RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 LEMD3Q9Y2U8 911 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 LOC285556D6RIA3 1793 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 CCDC88AQ3V6T2 1871 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 CCDC175P0C221 793 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 FOXO4P98177 505 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 IFT88Q13099 833 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 SLC30A9Q6PML9 568 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 KIAA1328Q86T90 577 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 PRDX5P30044 214 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 TUFMP49411 452 aaKnown RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 TTLL6Q8N841 843 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 UIMC1Q96RL1 719 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 PIH1D3Q9NQM4 214 aaKnown RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 DNAAF2Q9NVR5 837 aaKnown RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 MKRN1Q9UHC7 482 aaKnown RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 TPX2Q9ULW0 747 aaKnown RBP12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
PCDHGA1-201ENST00000378105 EBAG9O00559 213 aa12.02□□□□□ -0.48
PCDHGA1-201ENST00000378105 JAK2O60674 1132 aa12.02□□□□□ -0.48
PCDHGA1-201ENST00000378105 EPS15P42566 896 aa12.02□□□□□ -0.48
PCDHGA1-201ENST00000378105 TNNI2P48788 182 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms