RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SREBF2Q12772 1141 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 NR5A1Q13285 461 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 LBX2Q6XYB7 198 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 BLIDQ8IZY5 108 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 FAM177A1Q8N128 213 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-203ENST00000377344 MB21D1Q8N884 522 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 CUL5Q93034 780 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 CAPNS2Q96L46 248 aa14.87□□□□□ -0.03
CBWD3-203ENST00000377344 MRPL11Q9Y3B7 192 aaKnown RBP14.87□□□□□ -0.03
CBWD3-203ENST00000377344 ABCB11O95342 1321 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
CBWD3-203ENST00000377344 STAT3P40763 770 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 OAZ1P54368 228 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 GALNT17Q6IS24 598 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 REPS2Q8NFH8 660 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 BICD2Q8TD16 824 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 ZIC5Q96T25 663 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 TEX13BQ9BXU2 312 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 ZSCAN16Q9H4T2 348 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-203ENST00000377344 BTBD7Q9P203 1132 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 PNMA2Q9UL42 364 aa14.86□□□□□ -0.03
CBWD3-203ENST00000377344 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-203ENST00000377344 ESYT2A0FGR8 921 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 ADAMTS3O15072 1205 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 MRPL12P52815 198 aaKnown RBP14.85□□□□□ -0.03
CBWD3-203ENST00000377344 HTRA3P83110 453 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 RESTQ13127 1097 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 NOGQ13253 232 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 NPY5RQ15761 445 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 RASGRP4Q8TDF6 673 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 TNPO1Q92973 898 aaKnown RBP14.85□□□□□ -0.03
CBWD3-203ENST00000377344 TRERF1Q96PN7 1200 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 PARK7Q99497 189 aaKnown RBP14.85□□□□□ -0.03
CBWD3-203ENST00000377344 FOXP1Q9H334 677 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-203ENST00000377344 RIC8AQ9NPQ8 531 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 BIN2Q9UBW5 565 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-203ENST00000377344 AOC2O75106 756 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 CFBP00751 764 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 UBE2SQ16763 222 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 FAM173BQ6P4H8 233 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 POTEEQ6S8J3 1075 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 IFNL1Q8IU54 200 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 NOSTRINQ8IVI9 506 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 REXO1Q8N1G1 1221 aaKnown RBP14.85□□□□□ -0.03
CBWD3-203ENST00000377344 DAGLBQ8NCG7 672 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 GLT8D2Q9H1C3 349 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 RIPK3Q9Y572 518 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 ATP6V1DQ9Y5K8 247 aa14.85□□□□□ -0.03
CBWD3-203ENST00000377344 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 U2AF2P26368 475 aaKnown RBP eCLIP14.84□□□□□ -0.03
CBWD3-203ENST00000377344 TAF1CQ15572 869 aaPredicted RBP14.84□□□□□ -0.03
CBWD3-203ENST00000377344 JAKMIP3Q5VZ66 844 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 USP17L6PQ6QN14 398 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 GTF3C2Q8WUA4 911 aaPredicted RBP14.84□□□□□ -0.03
CBWD3-203ENST00000377344 SPATC1LQ9H0A9 340 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 TXNRD2Q9NNW7 524 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 RNF146Q9NTX7 359 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 PCDHA6Q9UN73 950 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 RABGAP1Q9Y3P9 1069 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 PCDHA8Q9Y5H6 950 aa14.84□□□□□ -0.03
CBWD3-203ENST00000377344 CCDC194A0A1B0GVG4 234 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 NFIBO00712 420 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 HOXA13P31271 388 aaPredicted RBP14.83□□□□□ -0.04
CBWD3-203ENST00000377344 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 PIK3AP1Q6ZUJ8 805 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 ANKRD13CQ8N6S4 541 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 TMEM260Q9NX78 707 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 A0A0G2JMZ2 1700 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 SMCHD1A6NHR9 2005 aa14.83□□□□□ -0.04
CBWD3-203ENST00000377344 GCOM1H8Y6P7 765 aaPredicted RBP14.82□□□□□ -0.04
CBWD3-203ENST00000377344 OPLAHO14841 1288 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 CNMDO75829 334 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 POLR2MP0CAP2 368 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 GCLCP48506 637 aaPredicted RBP14.82□□□□□ -0.04
CBWD3-203ENST00000377344 NSMFQ6X4W1 530 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 NCAPG2Q86XI2 1143 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 MCF2L2Q86YR7 1114 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 CLEC4DQ8WXI8 215 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 CHAMP1Q96JM3 812 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 NCLP19338 710 aaKnown RBP14.82□□□□□ -0.04
CBWD3-203ENST00000377344 ATP2B1P20020 1258 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 TM4SF4P48230 202 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 ERVK-9P63128 1117 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 ERVK-24P63145 666 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 Q3C1V9 767 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 TKFCQ3LXA3 575 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 NOM1Q5C9Z4 860 aaKnown RBP14.82□□□□□ -0.04
CBWD3-203ENST00000377344 EARS2Q5JPH6 523 aaKnown RBP14.82□□□□□ -0.04
CBWD3-203ENST00000377344 RIOX2Q8IUF8 465 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 GPRC5AQ8NFJ5 357 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 TBC1D5Q92609 795 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 PGBD1Q96JS3 809 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 ACAD9Q9H845 621 aa14.82□□□□□ -0.04
CBWD3-203ENST00000377344 ZCCHC17Q9NP64 241 aaKnown RBP14.82□□□□□ -0.04
CBWD3-203ENST00000377344 FAM205CA6NFA0 338 aa14.81□□□□□ -0.04
CBWD3-203ENST00000377344 M0R2N6 131 aa14.81□□□□□ -0.04
CBWD3-203ENST00000377344 MEIS2O14770 477 aa14.81□□□□□ -0.04
CBWD3-203ENST00000377344 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms