RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 NAPAP54920 295 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 TRIM29Q14134 588 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 KIF22Q14807 665 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 NOM1Q5C9Z4 860 aaKnown RBP15.18■□□□□ 0.02
TIMP1-202ENST00000377017 POTEEQ6S8J3 1075 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 TRERF1Q96PN7 1200 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 MAF1Q9H063 256 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 GLT8D2Q9H1C3 349 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 ACAD9Q9H845 621 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 HOMER2Q9NSB8 354 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 RNF146Q9NTX7 359 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
TIMP1-202ENST00000377017 RBM19Q9Y4C8 960 aaKnown RBP15.18■□□□□ 0.02
TIMP1-202ENST00000377017 RBBP6Q7Z6E9 1792 aaKnown RBP15.18■□□□□ 0.02
TIMP1-202ENST00000377017 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
TIMP1-202ENST00000377017 ERCC3P19447 782 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 GJB2P29033 226 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 SP3Q02447 781 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 PKN1Q16512 942 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 Q3C1V9 767 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 TEX2Q8IWB9 1127 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 GPKOWQ92917 476 aaPredicted RBP eCLIP15.17■□□□□ 0.02
TIMP1-202ENST00000377017 COA7Q96BR5 231 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
TIMP1-202ENST00000377017 GPR25O00155 361 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 STXBP3O00186 592 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 PEX10O60683 326 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
TIMP1-202ENST00000377017 FCGRTP55899 365 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 ARHGEF6Q15052 776 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 CUL5Q93034 780 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 RIPK3Q9Y572 518 aa15.16■□□□□ 0.02
TIMP1-202ENST00000377017 MGAMO43451 1857 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 ESYT2A0FGR8 921 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 STRNO43815 780 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 FKTNO75072 461 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 PDCP20941 246 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 CALML3P27482 149 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 GNA11P29992 359 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 LACTBP83111 547 aaPredicted RBP15.15■□□□□ 0.02
TIMP1-202ENST00000377017 KCTD2Q14681 263 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 GALNT17Q6IS24 598 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.15■□□□□ 0.02
TIMP1-202ENST00000377017 PLEKHH3Q7Z736 793 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 ERO1AQ96HE7 468 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 C8orf76Q96K31 380 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 MMP19Q99542 508 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 PORCNQ9H237 461 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 EFCC1Q9HA90 598 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 BRMS1Q9HCU9 246 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 C6orf50Q9HD87 102 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 MAP3K20Q9NYL2 800 aaKnown RBP15.15■□□□□ 0.02
TIMP1-202ENST00000377017 VPS54Q9P1Q0 977 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 PFASO15067 1338 aa15.15■□□□□ 0.02
TIMP1-202ENST00000377017 SMCHD1A6NHR9 2005 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 TNPO2O14787 897 aaKnown RBP15.14■□□□□ 0.01
TIMP1-202ENST00000377017 FCER1AP12319 257 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 ADCY7P51828 1080 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
TIMP1-202ENST00000377017 NLRP5P59047 1200 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 ABRAQ8N0Z2 381 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 ANKRD35Q8N283 1001 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 RGS22Q8NE09 1264 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 PSTPIP2Q9H939 334 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
TIMP1-202ENST00000377017 SMCO2A6NFE2 343 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
TIMP1-202ENST00000377017 CFBP00751 764 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 POLR2MP0CAP2 368 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 PDIA4P13667 645 aaKnown RBP15.13■□□□□ 0.01
TIMP1-202ENST00000377017 TAL1P17542 331 aaPredicted RBP15.13■□□□□ 0.01
TIMP1-202ENST00000377017 SAFBQ15424 915 aaKnown RBP eCLIP15.13■□□□□ 0.01
TIMP1-202ENST00000377017 NSMFQ6X4W1 530 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 RNF207Q6ZRF8 634 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 SOCS4Q8WXH5 440 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 CLEC4DQ8WXI8 215 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 AIFM3Q96NN9 605 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 ZMYND12Q9H0C1 365 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 RIC8AQ9NPQ8 531 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 SLC5A4Q9NY91 659 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 ZNF236Q9UL36 1845 aa15.13■□□□□ 0.01
TIMP1-202ENST00000377017 SLC15A5A6NIM6 579 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 H3BQV1 296 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 NFIBO00712 420 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 DTNBO60941 627 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 GNRH1P01148 92 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 HOXD10P28358 340 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 PSMC4P43686 418 aa15.12■□□□□ 0.01
TIMP1-202ENST00000377017 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms