RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PPP2R3AQ06190 1150 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 SPATA1Q5VX52 437 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 BRAPQ7Z569 592 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 FAM213AQ9BRX8 229 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 TUBAL3A6NHL2 446 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 HAUS5O94927 633 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 MSL3P1P0C860 447 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 STOMP27105 288 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 MAP4P27816 1152 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 SMTNP53814 917 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 STK4Q13043 487 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 ANO4Q32M45 955 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 ZNF483Q8TF39 744 aaPredicted RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 KLHL29Q96CT2 875 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 DYDC2Q96IM9 177 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 RBBP8Q99708 897 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 EHD1Q9H4M9 534 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 SARS2Q9NP81 518 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 GNL3LQ9NVN8 582 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 ERAP1Q9NZ08 941 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 EHD3Q9NZN3 535 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 PRR23AA6NEV1 266 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 HNRNPRO43390 633 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 MOCS3O95396 460 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 RPS2P15880 293 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 PRPF40BQ6NWY9 871 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 DEPDC7Q96QD5 511 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 RMND1Q9NWS8 449 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 CASC3O15234 703 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 PRMT3O60678 531 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 KHDRBS3O75525 346 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 KRT37O76014 449 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 IL12RB1P42701 662 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 METTL24Q5JXM2 366 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 ULK3Q6PHR2 472 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 CNNM3Q8NE01 707 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 DTX3LQ8TDB6 740 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 POMGNT1Q8WZA1 660 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 RIOK2Q9BVS4 552 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 KATNAL1Q9BW62 490 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 SENP3Q9H4L4 574 aaPredicted RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 ATRXP46100 2492 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 ZNF839A8K0R7 811 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 GPC3P51654 580 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 TUBA1BP68363 451 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 CUL1Q13616 776 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 UVSSAQ2YD98 709 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 TRIM16LQ309B1 348 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 TUBA1AQ71U36 451 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 PPP1R14AQ96A00 147 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 CALML4Q96GE6 196 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 TMOD4Q9NZQ9 345 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 STX7O15400 261 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 CHP2O43745 196 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 SOX6P35712 828 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 SERPINB8P50452 374 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 TBL3Q12788 808 aaKnown RBP6.47□□□□□ -1.37
SCN2A-202ENST00000375427 RASSF6Q6ZTQ3 369 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 CHAMP1Q96JM3 812 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 TRIM51Q9BSJ1 452 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 RIC8AQ9NPQ8 531 aa6.47□□□□□ -1.37
SCN2A-202ENST00000375427 GCLCP48506 637 aaPredicted RBP6.46□□□□□ -1.37
SCN2A-202ENST00000375427 RGS6P49758 472 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 LGALS3BPQ08380 585 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 CUL4AQ13619 759 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 C8orf74Q6P047 294 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 KIAA0408Q6ZU52 694 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 C17orf50Q8WW18 174 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 TADA1Q96BN2 335 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 LRRC39Q96DD0 335 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 RPRD1BQ9NQG5 326 aaKnown RBP6.46□□□□□ -1.37
SCN2A-202ENST00000375427 ZBTB40Q9NUA8 1239 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 LRRIQ3A6PVS8 624 aaPredicted RBP6.46□□□□□ -1.37
SCN2A-202ENST00000375427 NVLO15381 856 aaKnown RBP6.46□□□□□ -1.37
SCN2A-202ENST00000375427 KRT16P08779 473 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 PAMP19021 973 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 PMS2P54278 862 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 KRT32Q14532 448 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 ICE2Q659A1 982 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 FAM9CQ8IZT9 166 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 B4GALNT2Q8NHY0 566 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 SIN3AQ96ST3 1273 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 SAC3D1A6NKF1 404 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 NFIBO00712 420 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 ZNF189O75820 626 aaPredicted RBP6.46□□□□□ -1.37
SCN2A-202ENST00000375427 MX1P20591 662 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 S100A2P29034 98 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 AP1B1Q10567 949 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 EFCAB2Q5VUJ9 269 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 SLC25A24Q6NUK1 477 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 FAM160A2Q8N612 972 aaPredicted RBP6.46□□□□□ -1.37
SCN2A-202ENST00000375427 TSPAN18Q96SJ8 248 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 SYNDIG1Q9H7V2 258 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 SLC12A7Q9Y666 1083 aa6.46□□□□□ -1.37
SCN2A-202ENST00000375427 CFAP69A5D8W1 941 aa6.46□□□□□ -1.38
SCN2A-202ENST00000375427 MCM4P33991 863 aa6.46□□□□□ -1.38
SCN2A-202ENST00000375427 LRMPQ12912 555 aa6.46□□□□□ -1.38
SCN2A-202ENST00000375427 TBRG1Q3YBR2 411 aa6.46□□□□□ -1.38
SCN2A-202ENST00000375427 ARMC6Q6NXE6 501 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms