RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ADCY10Q96PN6 1610 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-203ENST00000375274 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 CCNE1P24864 410 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 TCP10Q12799 353 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 ZYXQ15942 572 aaKnown RBP12.68□□□□□ -0.38
PTCH1-203ENST00000375274 PRR16Q569H4 304 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 TET3O43151 1660 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 CXCR5P32302 372 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 KRT31Q15323 416 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 NAA35Q5VZE5 725 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 FRMPD2Q68DX3 1309 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-203ENST00000375274 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 TMEM232C9JQI7 657 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 GBP1P32455 592 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 TSNAXIP1Q2TAA8 658 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 DDX25Q9UHL0 483 aaKnown RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 GAS7O60861 476 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 CFAP157Q5JU67 520 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 EFCAB13Q8IY85 973 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 LRRC47Q8N1G4 583 aaKnown RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 COL4A3BPQ9Y5P4 624 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 CIB2O75838 187 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 CC2D1AQ6P1N0 951 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 DYNLL1P63167 89 aaKnown RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 GJA10Q969M2 543 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 KLHL14Q9P2G3 628 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 RNF14Q9UBS8 474 aa12.67□□□□□ -0.38
PTCH1-203ENST00000375274 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
PTCH1-203ENST00000375274 A0A087WUV0 522 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 DKC1O60832 514 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 IFT88Q13099 833 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 NLRP10Q86W26 655 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 CCDC110Q8TBZ0 833 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 CLTCL1P53675 1640 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 SEMA3EO15041 775 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 VPS41P49754 854 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 GTF2IP78347 998 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 TOGARAM2Q6ZUX3 1019 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 ALDH8A1Q9H2A2 487 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 NHEJ1Q9H9Q4 299 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 SEC31BQ9NQW1 1179 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 STK38LQ9Y2H1 464 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 TBC1D8O95759 1140 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 GYS2P54840 703 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 C2orf54Q08AI8 447 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 STRN3Q13033 797 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 CCDC62Q6P9F0 684 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 KIAA1024Q9UPX6 916 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 LRRC7Q96NW7 1537 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 NR2F2P24468 414 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 SLFN12Q8IYM2 578 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
PTCH1-203ENST00000375274 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 LARSQ9P2J5 1176 aaKnown RBP12.66□□□□□ -0.38
PTCH1-203ENST00000375274 HEG1Q9ULI3 1381 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 IFNB1P01574 187 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 MYCLP12524 364 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-203ENST00000375274 EIF4A3P38919 411 aaKnown RBP12.65□□□□□ -0.38
PTCH1-203ENST00000375274 MCAMP43121 646 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 RASSF2P50749 326 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 TRPC3Q13507 836 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 TCP11X2Q5H9J9 407 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 APBB1IPQ7Z5R6 666 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-203ENST00000375274 ARHGAP24Q8N264 748 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 KCNF1Q9H3M0 494 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 USP40Q9NVE5 1235 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 TOM1O60784 492 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 HSPA1LP34931 641 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 RASGRF1Q13972 1273 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 LRRC41Q15345 812 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 CCDC14Q49A88 953 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 MCTP2Q6DN12 878 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 DPP8Q6V1X1 898 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-203ENST00000375274 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 THAP9Q9H5L6 903 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 VPS37BQ9H9H4 285 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 SLAIN2Q9P270 581 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 CYP4A11Q02928 519 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 CCDC38Q502W7 563 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 ARL6IP4Q66PJ3 421 aaKnown RBP12.65□□□□□ -0.38
PTCH1-203ENST00000375274 PPP1R21Q6ZMI0 780 aa12.65□□□□□ -0.38
PTCH1-203ENST00000375274 SMCR8Q8TEV9 937 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-203ENST00000375274 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-203ENST00000375274 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms