RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RNF207Q6ZRF8 634 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 PSPC1Q8WXF1 523 aaKnown RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 ECT2Q9H8V3 914 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 TMEM67Q5HYA8 995 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 TMEM87AQ8NBN3 555 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 KIFC2Q96AC6 838 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 ZFRQ96KR1 1074 aaKnown RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 SLC38A10Q9HBR0 1119 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 CCDC88BA6NC98 1476 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 AOX1Q06278 1338 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 RSPH10B2B2RC85 870 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 SPOPO43791 374 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 RSPH10BP0C881 870 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 PYGMP11217 842 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 WDR44Q5JSH3 913 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 ATP8B4Q8TF62 1192 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 EXOC8Q8IYI6 725 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 OR9Q1Q8NGQ5 310 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 ESYT2A0FGR8 921 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 ATN1P54259 1190 aaPredicted RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 KCTD16Q68DU8 428 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 SAMD1Q6SPF0 538 aaPredicted RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 ARHGEF25Q86VW2 580 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 KLHL7Q8IXQ5 586 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 TRAIPQ9BWF2 469 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 C6orf203Q9P0P8 240 aaPredicted RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 SNX5Q9Y5X3 404 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 MARCKSP29966 332 aaPredicted RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 CRLF3Q8IUI8 442 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 ZGPATQ8N5A5 531 aaKnown RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 ANKRD42Q8N9B4 389 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 MCRS1Q96EZ8 462 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 FTOQ9C0B1 505 aaKnown RBP eCLIP7.2□□□□□ -1.265e-7■■□□□ 11.4
UBR4-204ENST00000375254 H7C0S8 307 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 HGSO14964 777 aaPredicted RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 PDHA1P08559 390 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 RTN1Q16799 776 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TRAPPC9Q96Q05 1148 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TRIM56Q9BRZ2 755 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 AFMP43652 599 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 CNGA2Q16280 664 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 LETM2Q2VYF4 491 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 GRAMD1BQ3KR37 738 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 KRT79Q5XKE5 535 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 SPDYE1Q8NFV5 336 aaPredicted RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 CSRNP1Q96S65 589 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 DMAP1Q9NPF5 467 aaPredicted RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 SENP1Q9P0U3 644 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 UBN2Q6ZU65 1347 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TTKP33981 857 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 C1orf146Q5VVC0 180 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 YTHDF3Q7Z739 585 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 EFHD2Q96C19 240 aaPredicted RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 MTRQ99707 1265 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 SH3GLB1Q9Y371 365 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 MT-ND3P03897 115 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ZBTB10Q96DT7 871 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ELAC2Q9BQ52 826 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 EPB41L5Q9HCM4 733 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TMOD2Q9NZR1 351 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TRPC6Q9Y210 931 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 PRKAR2BP31323 418 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ASIC1P78348 528 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ITIH4Q14624 930 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 POTEAQ6S8J7 498 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 RNF217Q8TC41 542 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 SAP30BPQ9UHR5 308 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 COMMD10Q9Y6G5 202 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 MDH1P40925 334 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 FLIIQ13045 1269 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 CSGALNACT2Q8N6G5 542 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 MID2Q9UJV3 735 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 SYT2Q8N9I0 419 aaPredicted RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 LCMT1Q9UIC8 334 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 POLA1P09884 1462 aaPredicted RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 PPP1R37O75864 691 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ADARP55265 1226 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 MTBPQ96DY7 904 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 SLF1Q9BQI6 1058 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TPCN1Q9ULQ1 816 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 EEF2P13639 858 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 PPP2R2AP63151 447 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 KAZNQ674X7 775 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 C1orf50Q9BV19 199 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 BOLA2Q9H3K6 86 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 PYCARDQ9ULZ3 195 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 VHLP40337 213 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 GOLGA8RI6L899 631 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 MAP4P27816 1152 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 S100A5P33763 92 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ATAD3BQ5T9A4 648 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TMC5Q6UXY8 1006 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 GPT2Q8TD30 523 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 PMS1P54277 932 aaKnown RBP7.19□□□□□ -1.26
UBR4-204ENST00000375254 RUNDC3AQ59EK9 446 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ANKRD44Q8N8A2 993 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 MAGEF1Q9HAY2 307 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 ETNK1Q9HBU6 452 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 DLGAP2Q9P1A6 1054 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms