RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZBTB12Q9Y330 459 aaPredicted RBP9.25□□□□□ -0.93
UBR4-202ENST00000375224 PNMA6FA0A0J9YX94 578 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 MPHOSPH10O00566 681 aaKnown RBP9.25□□□□□ -0.93
UBR4-202ENST00000375224 TUBB4AP04350 444 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 OR52Z1P0C646 297 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 ADCY7P51828 1080 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 RBM5P52756 815 aaKnown RBP eCLIP9.25□□□□□ -0.931e-7■■■□□ 15.1
UBR4-202ENST00000375224 CCDC47Q96A33 483 aaKnown RBP9.25□□□□□ -0.93
UBR4-202ENST00000375224 PAXBP1Q9Y5B6 917 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 SETQ01105 290 aaPredicted RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 KIAA0825Q8IV33 1275 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 LRRC47Q8N1G4 583 aaKnown RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 SYNRGQ9UMZ2 1314 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 ADAMTS3O15072 1205 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 CCNT1O60563 726 aaKnown RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 FMR1Q06787 632 aaKnown RBP eCLIP9.24□□□□□ -0.933e-7■■■□□ 19.2
UBR4-202ENST00000375224 FILIP1LQ4L180 1135 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 CREBRFQ8IUR6 639 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 KANSL2Q9H9L4 492 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 SLX4Q8IY92 1834 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 GREB1LQ9C091 1923 aaPredicted RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 FRMPD2Q68DX3 1309 aaPredicted RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 CUL4BQ13620 913 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 ARID5BQ14865 1188 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 LETM2Q2VYF4 491 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 ZNF658Q5TYW1 1059 aaPredicted RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 ANKRD20A12PQ8NF67 263 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 DCAF4Q8WV16 495 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 MKL1Q969V6 931 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 NAP1L4Q99733 375 aaKnown RBP9.24□□□□□ -0.93
UBR4-202ENST00000375224 NYAP2Q9P242 653 aa9.24□□□□□ -0.93
UBR4-202ENST00000375224 RPN1P04843 607 aaKnown RBP9.23□□□□□ -0.93
UBR4-202ENST00000375224 MRPL12P52815 198 aaKnown RBP9.23□□□□□ -0.93
UBR4-202ENST00000375224 SPAG1Q07617 926 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 PTPN14Q15678 1187 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 CCDC96Q2M329 555 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 CERKLQ49MI3 558 aaPredicted RBP9.23□□□□□ -0.93
UBR4-202ENST00000375224 ARMCX5Q6P1M9 558 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 RAB34Q9BZG1 259 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 TMEM60Q9H2L4 133 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 CPVLQ9H3G5 476 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 GPCPD1Q9NPB8 672 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 MYH4Q9Y623 1939 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 ENTPD3O75355 529 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 AMPD3Q01432 767 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 NFIAQ12857 509 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 STIM1Q13586 685 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 KCNB1Q14721 858 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 ZSCAN29Q8IWY8 852 aaPredicted RBP9.23□□□□□ -0.93
UBR4-202ENST00000375224 CCAR2Q8N163 923 aaKnown RBP9.23□□□□□ -0.93
UBR4-202ENST00000375224 TBCKQ8TEA7 893 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 C7orf43Q8WVR3 580 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 DPF2Q92785 391 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 RIC8AQ9NPQ8 531 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 RWDD2AQ9UIY3 292 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 SH3BP1Q9Y3L3 701 aa9.23□□□□□ -0.93
UBR4-202ENST00000375224 PPP1R2P41236 205 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 EIF6P56537 245 aaKnown RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 ATP2B2Q01814 1243 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 RAD51AP2Q09MP3 1159 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 KARSQ15046 597 aaKnown RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 MCTP2Q6DN12 878 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 CABP7Q86V35 215 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 ADGRF4Q8IZF3 695 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 CUL5Q93034 780 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 CALML4Q96GE6 196 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 C16orf45Q96MC5 204 aaPredicted RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 JMJD4Q9H9V9 463 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 BIN2Q9UBW5 565 aaPredicted RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 ZBTB5O15062 677 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 HOXA7P31268 230 aaPredicted RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 JAKMIP3Q5VZ66 844 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 KLHL10Q6JEL2 608 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 TMEM179Q6ZVK1 233 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 CCDC91Q7Z6B0 441 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 FCHSD1Q86WN1 690 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 C10orf67Q8IYJ2 551 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 RNF217Q8TC41 542 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 CAMKK2Q96RR4 588 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 COL2A1P02458 1487 aaPredicted RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 A0A1B0GTH6 734 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 GUCY2CP25092 1073 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 CHRNA5P30532 468 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 PAK1Q13153 545 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 NR1I3Q14994 352 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 CEP135Q66GS9 1140 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 TATDN1Q6P1N9 297 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 RASGRP2Q7LDG7 609 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 RTKN2Q8IZC4 609 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 MTMR8Q96EF0 704 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 BLZF1Q9H2G9 400 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 KCNQ5Q9NR82 932 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 SAMSN1Q9NSI8 373 aaKnown RBP9.22□□□□□ -0.93
UBR4-202ENST00000375224 TMOD2Q9NZR1 351 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms