RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 SDCCAG8Q86SQ7 713 aaPredicted RBP23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 PHKA1P46020 1223 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 EXOC3L4Q17RC7 722 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 ZNF579Q8NAF0 562 aaKnown RBP23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 ACRBPQ8NEB7 543 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 KIFC2Q96AC6 838 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 PBKQ96KB5 322 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 RPAP1Q9BWH6 1393 aaPredicted RBP23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 ABCB6Q9NP58 842 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 MED14O60244 1454 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 PGRMC1O00264 195 aaKnown RBP23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 AFAP1L2Q8N4X5 818 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 OSBP2Q969R2 916 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 CFAP74Q9C0B2 1584 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 PKD2L1Q9P0L9 805 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 SOS2Q07890 1332 aaPredicted RBP23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 KIF3CO14782 793 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 ATP1A3P13637 1013 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 ADORA1P30542 326 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 MICAL1Q8TDZ2 1067 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 MRRFQ96E11 262 aaKnown RBP23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 PGBD1Q96JS3 809 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 USH1CQ9Y6N9 552 aa23.22■■□□□ 1.31
TGFBR1-202ENST00000374994 YWHAEP62258 255 aaKnown RBP23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 FKBP3Q00688 224 aaKnown RBP23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 PUS3Q9BZE2 481 aaKnown RBP23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 MORC2Q9Y6X9 1032 aaPredicted RBP23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 EVI5O60447 810 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 KIF2CQ99661 725 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 BCAMP50895 628 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 CC2D1AQ6P1N0 951 aaPredicted RBP23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 CDAN1Q8IWY9 1227 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 ANKRD13CQ8N6S4 541 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 GPKOWQ92917 476 aaPredicted RBP eCLIP23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 ADCY8P40145 1251 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 HNRNPH2P55795 449 aaKnown RBP23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 USTQ9Y2C2 406 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 ARHGEF25Q86VW2 580 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 PLEKHA4Q9H4M7 779 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 METP08581 1390 aa23.21■■□□□ 1.31
TGFBR1-202ENST00000374994 KCNJ6P48051 423 aa23.2■■□□□ 1.31
TGFBR1-202ENST00000374994 SLC8A3P57103 927 aa23.2■■□□□ 1.31
TGFBR1-202ENST00000374994 SEPT2Q15019 361 aa23.2■■□□□ 1.31
TGFBR1-202ENST00000374994 GLE1Q53GS7 698 aaKnown RBP23.2■■□□□ 1.31
TGFBR1-202ENST00000374994 CCDC13Q8IYE1 715 aa23.2■■□□□ 1.31
TGFBR1-202ENST00000374994 CCDC89Q8N998 374 aa23.2■■□□□ 1.31
TGFBR1-202ENST00000374994 EPB41L5Q9HCM4 733 aa23.2■■□□□ 1.31
TGFBR1-202ENST00000374994 INTS9Q9NV88 658 aaKnown RBP23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 FOSP01100 380 aaPredicted RBP23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 MGARPQ8TDB4 240 aa23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 PAGE5Q96GU1 130 aa23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 DDX25Q9UHL0 483 aaKnown RBP23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 ANO9A1A5B4 782 aa23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 GAS7O60861 476 aa23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 KCTD16Q68DU8 428 aa23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 PARP3Q9Y6F1 533 aa23.2■■□□□ 1.3
TGFBR1-202ENST00000374994 A0A087WWV3 80 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 PPP1R21Q6ZMI0 780 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 FMR1NBQ8N0W7 255 aaPredicted RBP23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 MIPOL1Q8TD10 442 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 SPZ1Q9BXG8 430 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 STK36Q9NRP7 1315 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 GCFC2P16383 781 aaKnown RBP23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 MUM1Q2TAK8 710 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 IFT88Q13099 833 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 PSMD2Q13200 908 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 ATP2A3Q93084 1043 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 MTA3Q9BTC8 594 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 RAB20Q9NX57 234 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 STK38LQ9Y2H1 464 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 UGGT1Q9NYU2 1555 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 EFCAB6Q5THR3 1501 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 THAP12O43422 761 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 GMNNO75496 209 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 PTPREP23469 700 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 RNASELQ05823 741 aaKnown RBP23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 NHEJ1Q9H9Q4 299 aaPredicted RBP23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 PREX2Q70Z35 1606 aa23.19■■□□□ 1.3
TGFBR1-202ENST00000374994 HGSO14964 777 aaPredicted RBP23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 TPH2Q8IWU9 490 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 TBC1D31Q96DN5 1066 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 GREM2Q9H772 168 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 LARSQ9P2J5 1176 aaKnown RBP23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 BCORL1Q5H9F3 1711 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 H0YCG3 227 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 EIF3BP55884 814 aaKnown RBP23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 ADAM21Q9UKJ8 722 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 TPD52P55327 224 aaPredicted RBP23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 NNTQ13423 1086 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 CASQ2O14958 399 aaPredicted RBP23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 SMC1BQ8NDV3 1235 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 DAAM1Q9Y4D1 1078 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 HMGB1P1B2RPK0 211 aaPredicted RBP23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 RCAN1P53805 252 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 AOC3Q16853 763 aa23.18■■□□□ 1.3
TGFBR1-202ENST00000374994 ARL1P40616 181 aaPredicted RBP23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 ZFYVE16Q7Z3T8 1539 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 LMNB2Q03252 620 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 CHRNDQ07001 517 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms