RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 GTF2A2P52657 109 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 GSDMDP57764 484 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 TROAPQ12815 778 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 DGKZQ13574 1117 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 ARID5BQ14865 1188 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 ZNF280CQ8ND82 737 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 CCDC17Q96LX7 622 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 PTPN18Q99952 460 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 IFNKQ9P0W0 207 aa17.68■□□□□ 0.42
CCDC40-202ENST00000374876 V9GY48 417 aaPredicted RBP17.68■□□□□ 0.42
CCDC40-202ENST00000374876 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 MANSC4A6NHS7 340 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-202ENST00000374876 PLEKHA8P1O95397 391 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 KRT2P35908 639 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 FUT2Q10981 343 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 SNAPC2Q13487 334 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 NCAPHQ15003 741 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 PKN1Q16512 942 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 CCL15Q16663 113 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 XPO4Q9C0E2 1151 aaKnown RBP17.67■□□□□ 0.42
CCDC40-202ENST00000374876 ZNF287Q9HBT7 754 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 IMPACTQ9P2X3 320 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 KCNH4Q9UQ05 1017 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 PHIPQ8WWQ0 1821 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 SKILP12757 684 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 TM4SF4P48230 202 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 ELOA2Q8IYF1 753 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-202ENST00000374876 ZNF579Q8NAF0 562 aaKnown RBP17.67■□□□□ 0.42
CCDC40-202ENST00000374876 BRI3BPQ8WY22 251 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 BRMS1Q9HCU9 246 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 GINM1Q9NU53 330 aa17.67■□□□□ 0.42
CCDC40-202ENST00000374876 SRPRBQ9Y5M8 271 aaKnown RBP17.67■□□□□ 0.42
CCDC40-202ENST00000374876 hCG_1642624A0A1W2PR95 340 aa17.66■□□□□ 0.42
CCDC40-202ENST00000374876 CXCL11O14625 94 aa17.66■□□□□ 0.42
CCDC40-202ENST00000374876 GTF2F1P35269 517 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC40-202ENST00000374876 TFAP4Q01664 338 aa17.66■□□□□ 0.42
CCDC40-202ENST00000374876 TPD52L1Q16890 204 aaPredicted RBP17.66■□□□□ 0.42
CCDC40-202ENST00000374876 TMEM179Q6ZVK1 233 aa17.66■□□□□ 0.42
CCDC40-202ENST00000374876 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
CCDC40-202ENST00000374876 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
CCDC40-202ENST00000374876 C16orf45Q96MC5 204 aaPredicted RBP17.66■□□□□ 0.42
CCDC40-202ENST00000374876 PHF20Q9BVI0 1012 aa17.66■□□□□ 0.42
CCDC40-202ENST00000374876 AS3MTQ9HBK9 375 aa17.66■□□□□ 0.42
CCDC40-202ENST00000374876 IGF2BP3O00425 579 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCDC40-202ENST00000374876 CETPP11597 493 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 MYL5Q02045 173 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 GRIN1Q05586 938 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 SREBF2Q12772 1141 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 SIAH1Q8IUQ4 282 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 PCDHA5Q9Y5H7 936 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 POLR2DO15514 142 aaKnown RBP17.65■□□□□ 0.42
CCDC40-202ENST00000374876 NMT2O60551 498 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 TSPY3P0CV98 308 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 TSPY8P0CW00 308 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 HMGCS2P54868 508 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
CCDC40-202ENST00000374876 MTMR2Q13614 643 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 ZYXQ15942 572 aaKnown RBP17.65■□□□□ 0.42
CCDC40-202ENST00000374876 SHISA4Q96DD7 197 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 WDR18Q9BV38 432 aa17.65■□□□□ 0.42
CCDC40-202ENST00000374876 A0A1W2PRG0 241 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 USP17L10C9JJH3 530 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 BACE1P56817 501 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 INHBEP58166 350 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 FANCCQ00597 558 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 ATP2B2Q01814 1243 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 MOGSQ13724 837 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 POSTNQ15063 836 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 TMC6Q7Z403 805 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 IFNL1Q8IU54 200 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 PDCL3Q9H2J4 239 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 WBP1LQ9NX94 342 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 MYH6P13533 1939 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 A0A0G2JLL6 359 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-202ENST00000374876 TESPA1A2RU30 521 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-202ENST00000374876 TRPA1O75762 1119 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 MDM2Q00987 491 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-202ENST00000374876 ICA1Q05084 483 aa17.64■□□□□ 0.41
CCDC40-202ENST00000374876 PRRT2Q7Z6L0 340 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-202ENST00000374876 BTBD19C9JJ37 291 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 FOXN1O15353 648 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 EEF2P13639 858 aaKnown RBP17.63■□□□□ 0.41
CCDC40-202ENST00000374876 TNNT1P13805 278 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 CCZ1BP86790 482 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 CCZ1P86791 482 aaPredicted RBP17.63■□□□□ 0.41
CCDC40-202ENST00000374876 DHX8Q14562 1220 aaKnown RBP17.63■□□□□ 0.41
CCDC40-202ENST00000374876 KANK3Q6NY19 840 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 MAP7D2Q96T17 732 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 CSRNP2Q9H175 543 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 KANSL2Q9H9L4 492 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 RNF186Q9NXI6 227 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 SERTAD1Q9UHV2 236 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 TSKSQ9UJT2 592 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 THSD7BQ9C0I4 1608 aa17.63■□□□□ 0.41
CCDC40-202ENST00000374876 CNTNAP5Q8WYK1 1306 aa17.62■□□□□ 0.41
CCDC40-202ENST00000374876 FAM205CA6NFA0 338 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms