RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 TPCN1Q9ULQ1 816 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 MRPL11Q9Y3B7 192 aaKnown RBP17.63■□□□□ 0.41
PFDN6-202ENST00000374607 PCDHA1Q9Y5I3 950 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 ZNF536O15090 1300 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 ABCB11O95342 1321 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 MGAMO43451 1857 aa17.63■□□□□ 0.41
PFDN6-202ENST00000374607 CYTH3O43739 400 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 CDKL5O76039 1030 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 ADORA2AP29274 412 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 FLT3LGP49771 235 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 TRIM22Q8IYM9 498 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 KIF2CQ99661 725 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 BIN2Q9UBW5 565 aaPredicted RBP17.62■□□□□ 0.41
PFDN6-202ENST00000374607 GABRQQ9UN88 632 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 LIMCH1Q9UPQ0 1083 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 HPS5Q9UPZ3 1129 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 PTPN22Q9Y2R2 807 aa17.62■□□□□ 0.41
PFDN6-202ENST00000374607 hCG_1642624A0A1W2PR95 340 aa17.61■□□□□ 0.41
PFDN6-202ENST00000374607 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
PFDN6-202ENST00000374607 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
PFDN6-202ENST00000374607 MAP2K5Q13163 448 aa17.61■□□□□ 0.41
PFDN6-202ENST00000374607 FBXO46Q6PJ61 603 aaPredicted RBP17.61■□□□□ 0.41
PFDN6-202ENST00000374607 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
PFDN6-202ENST00000374607 ABRAQ8N0Z2 381 aa17.61■□□□□ 0.41
PFDN6-202ENST00000374607 SLC26A6Q9BXS9 759 aa17.61■□□□□ 0.41
PFDN6-202ENST00000374607 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
PFDN6-202ENST00000374607 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
PFDN6-202ENST00000374607 TAL1P17542 331 aaPredicted RBP17.6■□□□□ 0.41
PFDN6-202ENST00000374607 GRB14Q14449 540 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 MUM1L1Q5H9M0 696 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 MORN1Q5T089 497 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 MTMR8Q96EF0 704 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
PFDN6-202ENST00000374607 PTCH2Q9Y6C5 1203 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 PFASO15067 1338 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 ZSWIM8A7E2V4 1837 aa17.6■□□□□ 0.41
PFDN6-202ENST00000374607 NID2Q14112 1375 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 POTEB2H3BUK9 544 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 PFKFB2O60825 505 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 MCM2P49736 904 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 CAP1Q01518 475 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 SLC9C1Q4G0N8 1177 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 TRMT44Q8IYL2 757 aaKnown RBP17.59■□□□□ 0.41
PFDN6-202ENST00000374607 PHKBQ93100 1093 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 APBA2Q99767 749 aa17.59■□□□□ 0.41
PFDN6-202ENST00000374607 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
PFDN6-202ENST00000374607 ADCY3O60266 1144 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 PGK2P07205 417 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 CALML3P27482 149 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 SCRN1Q12765 414 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 ME3Q16798 604 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 SLC35G1Q2M3R5 365 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 NECAB1Q8N987 351 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 CUL5Q93034 780 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 SH2B1Q9NRF2 756 aaPredicted RBP17.58■□□□□ 0.4
PFDN6-202ENST00000374607 GJD2Q9UKL4 321 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 MYH6P13533 1939 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 PLXNB2O15031 1838 aa17.58■□□□□ 0.4
PFDN6-202ENST00000374607 NFIBO00712 420 aa17.57■□□□□ 0.4
PFDN6-202ENST00000374607 PRPF3O43395 683 aaKnown RBP17.57■□□□□ 0.4
PFDN6-202ENST00000374607 CFBP00751 764 aa17.57■□□□□ 0.4
PFDN6-202ENST00000374607 IFNAR1P17181 557 aa17.57■□□□□ 0.4
PFDN6-202ENST00000374607 GRK4P32298 578 aa17.57■□□□□ 0.4
PFDN6-202ENST00000374607 NAPAP54920 295 aa17.57■□□□□ 0.4
PFDN6-202ENST00000374607 IRF5Q13568 498 aa17.57■□□□□ 0.4
PFDN6-202ENST00000374607 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
PFDN6-202ENST00000374607 MPHOSPH6Q99547 160 aaKnown RBP17.57■□□□□ 0.4
PFDN6-202ENST00000374607 RNF26Q9BY78 433 aaPredicted RBP17.57■□□□□ 0.4
PFDN6-202ENST00000374607 A1CFQ9NQ94 594 aaKnown RBP17.57■□□□□ 0.4
PFDN6-202ENST00000374607 PPP1R11O60927 126 aaPredicted RBP17.56■□□□□ 0.4
PFDN6-202ENST00000374607 XRCC5P13010 732 aaKnown RBP17.56■□□□□ 0.4
PFDN6-202ENST00000374607 UBXN2AP68543 259 aa17.56■□□□□ 0.4
PFDN6-202ENST00000374607 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
PFDN6-202ENST00000374607 MFSD14CQ5VZR4 134 aa17.56■□□□□ 0.4
PFDN6-202ENST00000374607 CCDC12Q8WUD4 166 aaPredicted RBP17.56■□□□□ 0.4
PFDN6-202ENST00000374607 GPKOWQ92917 476 aaPredicted RBP eCLIP17.56■□□□□ 0.4
PFDN6-202ENST00000374607 GTF3C6Q969F1 213 aa17.56■□□□□ 0.4
PFDN6-202ENST00000374607 CYP39A1Q9NYL5 469 aa17.56■□□□□ 0.4
PFDN6-202ENST00000374607 GCOM1H8Y6P7 765 aaPredicted RBP17.55■□□□□ 0.4
PFDN6-202ENST00000374607 hCG_1984214I3L0E3 225 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 COBLO75128 1261 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 POLR2MP0CAP2 368 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 SCG2P13521 617 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 ELNP15502 786 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 CCDC83Q8IWF9 413 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 ZNF713Q8N859 430 aaPredicted RBP17.55■□□□□ 0.4
PFDN6-202ENST00000374607 SMARCC2Q8TAQ2 1214 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 NPLOC4Q8TAT6 608 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 PXYLP1Q8TE99 480 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 CLEC4DQ8WXI8 215 aa17.55■□□□□ 0.4
PFDN6-202ENST00000374607 ADD3Q9UEY8 706 aaKnown RBP17.55■□□□□ 0.4
PFDN6-202ENST00000374607 B4DLN1 442 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 DEXIO95424 95 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 LARGE1O95461 756 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 XBP1P17861 261 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms