RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PPP1R9AQ9ULJ8 1098 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PCDHA6Q9UN73 950 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 CTDP1Q9Y5B0 961 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-202ENST00000374339 PCDHA8Q9Y5H6 950 aa11.09□□□□□ -0.63
PTPN20-202ENST00000374339 ABCB11O95342 1321 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L15C9J2P7 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L13C9JLJ4 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L11C9JVI0 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L18D6R9N7 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L22D6RA61 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L17D6RBQ6 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L19D6RCP7 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L20D6RJB6 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 CXCL11O14625 94 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 SPTLC2O15270 562 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 ZBED4O75132 1171 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 ICAM1P05362 532 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 ME1P48163 572 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L24Q0WX57 530 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 NONOQ15233 471 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN20-202ENST00000374339 C2orf69Q8N8R5 385 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 ZNF526Q8TF50 670 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-202ENST00000374339 SLC10A4Q96EP9 437 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 ZNF408Q9H9D4 720 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 FBXO28Q9NVF7 368 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 MRPL11Q9Y3B7 192 aaKnown RBP11.08□□□□□ -0.64
PTPN20-202ENST00000374339 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 MORC2Q9Y6X9 1032 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-202ENST00000374339 TRPM7Q96QT4 1865 aa11.08□□□□□ -0.64
PTPN20-202ENST00000374339 A0A0G2JLL6 359 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 TRAF5O00463 557 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 PPP6R2O75170 966 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 TOB1P50616 345 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 ORC2Q13416 577 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 COG2Q14746 738 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 USH1GQ495M9 461 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 TTC38Q5R3I4 469 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 PRRT2Q7Z6L0 340 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 OPTNQ96CV9 577 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 CLMNQ96JQ2 1002 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 SLC38A10Q9HBR0 1119 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 GBA2Q9HCG7 927 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 HOXC10Q9NYD6 342 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 KCNH4Q9UQ05 1017 aa11.07□□□□□ -0.64
PTPN20-202ENST00000374339 RBBP6Q7Z6E9 1792 aaKnown RBP11.07□□□□□ -0.64
PTPN20-202ENST00000374339 IRF6O14896 467 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 FOSP01100 380 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-202ENST00000374339 CLK2P49760 499 aaKnown RBP11.06□□□□□ -0.64
PTPN20-202ENST00000374339 OAZ1P54368 228 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 SNAP25P60880 206 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 PABPC4Q13310 644 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTPN20-202ENST00000374339 AP3B2Q13367 1082 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 CCDC174Q6PII3 467 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 CATSPERGQ6ZRH7 1159 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 MOB2Q70IA6 237 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 FASTKD5Q7L8L6 764 aaKnown RBP11.06□□□□□ -0.64
PTPN20-202ENST00000374339 SAMD3Q8N6K7 520 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 NAP1L4Q99733 375 aaKnown RBP11.06□□□□□ -0.64
PTPN20-202ENST00000374339 BIN2Q9UBW5 565 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-202ENST00000374339 CCPG1Q9ULG6 757 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 RLFQ13129 1914 aa11.06□□□□□ -0.64
PTPN20-202ENST00000374339 A0A1W2PQ27 194 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 A0A1W2PQ64 194 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 A0A1W2PQD8 194 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 PIK3CDO00329 1044 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 LAD1O00515 517 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 VWA5AO00534 786 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-202ENST00000374339 CELF2O95319 508 aaKnown RBP11.05□□□□□ -0.64
PTPN20-202ENST00000374339 SNAPC2Q13487 334 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 PTPAQ15257 358 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 EARS2Q5JPH6 523 aaKnown RBP11.05□□□□□ -0.64
PTPN20-202ENST00000374339 ADALQ6DHV7 355 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 NEK8Q86SG6 692 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 MCF2L2Q86YR7 1114 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 MB21D1Q8N884 522 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 GPT2Q8TD30 523 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 FERMT2Q96AC1 680 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 EHMT1Q9H9B1 1298 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-202ENST00000374339 ADAMTS5Q9UNA0 930 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 PCDHB6Q9Y5E3 794 aa11.05□□□□□ -0.64
PTPN20-202ENST00000374339 COL11A1P12107 1806 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-202ENST00000374339 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 ATP2A1O14983 1001 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-202ENST00000374339 CUTAO60888 179 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 ATP2B1P20020 1258 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 HOXA7P31268 230 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-202ENST00000374339 DGKZQ13574 1117 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 INF2Q27J81 1249 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 JAKMIP3Q5VZ66 844 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 GADL1Q6ZQY3 521 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms