RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CENPFP49454 3210 aa20.16■□□□□ 0.82
C9orf43-202ENST00000374165 MYPNQ86TC9 1320 aa20.16■□□□□ 0.82
C9orf43-202ENST00000374165 ZBED4O75132 1171 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 LBX2Q6XYB7 198 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 HOMER2Q9NSB8 354 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 CCPG1Q9ULG6 757 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 A0A0G2JMZ2 1700 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 FAM205CA6NFA0 338 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 M0R2N6 131 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 U2AF2P26368 475 aaKnown RBP eCLIP20.15■□□□□ 0.82
C9orf43-202ENST00000374165 SKOR2Q2VWA4 1001 aaPredicted RBP20.15■□□□□ 0.82
C9orf43-202ENST00000374165 ANKRD23Q86SG2 305 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 R3HDMLQ9H3Y0 253 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 RBPJLQ9UBG7 517 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 PCDHA4Q9UN74 947 aa20.15■□□□□ 0.82
C9orf43-202ENST00000374165 hCG_1984214I3L0E3 225 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 DEFB115Q30KQ5 88 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 ZNF713Q8N859 430 aaPredicted RBP20.14■□□□□ 0.81
C9orf43-202ENST00000374165 TNFRSF25Q93038 417 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 GZF1Q9H116 711 aaPredicted RBP20.14■□□□□ 0.81
C9orf43-202ENST00000374165 RASSF10A6NK89 507 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 PRPF40AO75400 957 aaKnown RBP20.14■□□□□ 0.81
C9orf43-202ENST00000374165 CNMDO75829 334 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 ALAS1P13196 640 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 PDIA4P13667 645 aaKnown RBP20.14■□□□□ 0.81
C9orf43-202ENST00000374165 PLS1Q14651 629 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 UBE2SQ16763 222 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 MUM1L1Q5H9M0 696 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 USP17L6PQ6QN14 398 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 BLIDQ8IZY5 108 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 RGS22Q8NE09 1264 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 CCDC148Q8NFR7 591 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 PSTPIP2Q9H939 334 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 TMEM260Q9NX78 707 aa20.14■□□□□ 0.81
C9orf43-202ENST00000374165 ESYT2A0FGR8 921 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 MANSC4A6NHS7 340 aaPredicted RBP20.13■□□□□ 0.81
C9orf43-202ENST00000374165 AOC2O75106 756 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 OSBPP22059 807 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 KRT2P35908 639 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 PABPC4Q13310 644 aaKnown RBP eCLIP20.13■□□□□ 0.81
C9orf43-202ENST00000374165 Q3C1V9 767 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 SNRNP48Q6IEG0 339 aaKnown RBP20.13■□□□□ 0.81
C9orf43-202ENST00000374165 CCDC12Q8WUD4 166 aaPredicted RBP20.13■□□□□ 0.81
C9orf43-202ENST00000374165 CLEC4DQ8WXI8 215 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 PAGR1Q9BTK6 254 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 BIN2Q9UBW5 565 aaPredicted RBP20.13■□□□□ 0.81
C9orf43-202ENST00000374165 PCDHA6Q9UN73 950 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 PCDHA8Q9Y5H6 950 aa20.13■□□□□ 0.81
C9orf43-202ENST00000374165 NFIBO00712 420 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 MEIS2O14770 477 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 FDX1P10109 184 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 SAFBQ15424 915 aaKnown RBP eCLIP20.12■□□□□ 0.81
C9orf43-202ENST00000374165 FOXP1Q9H334 677 aaPredicted RBP20.12■□□□□ 0.81
C9orf43-202ENST00000374165 C6orf50Q9HD87 102 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 RIC8AQ9NPQ8 531 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 CTDP1Q9Y5B0 961 aaPredicted RBP20.12■□□□□ 0.81
C9orf43-202ENST00000374165 MYH15Q9Y2K3 1946 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 ATP2A1O14983 1001 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 CALML3P27482 149 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 ADCY7P51828 1080 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 NOSTRINQ8IVI9 506 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 CAPNS2Q96L46 248 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 SLC45A1Q9Y2W3 748 aa20.12■□□□□ 0.81
C9orf43-202ENST00000374165 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
C9orf43-202ENST00000374165 GNA11P29992 359 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 HOXA13P31271 388 aaPredicted RBP20.11■□□□□ 0.81
C9orf43-202ENST00000374165 STAT3P40763 770 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 KLHL40Q2TBA0 621 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 PPP1R18Q6NYC8 613 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 IFNL1Q8IU54 200 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 DAGLBQ8NCG7 672 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 SMCR8Q8TEV9 937 aaPredicted RBP20.11■□□□□ 0.81
C9orf43-202ENST00000374165 PGBD1Q96JS3 809 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 TEX13BQ9BXU2 312 aa20.11■□□□□ 0.81
C9orf43-202ENST00000374165 OAZ1P54368 228 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 DNM1Q05193 864 aaKnown RBP20.1■□□□□ 0.81
C9orf43-202ENST00000374165 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
C9orf43-202ENST00000374165 JAKMIP3Q5VZ66 844 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 CUL5Q93034 780 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 TRERF1Q96PN7 1200 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 FTOQ9C0B1 505 aaKnown RBP eCLIP20.1■□□□□ 0.81
C9orf43-202ENST00000374165 ZSCAN16Q9H4T2 348 aaPredicted RBP20.1■□□□□ 0.81
C9orf43-202ENST00000374165 PNMA3Q9UL41 463 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 ATP6V1DQ9Y5K8 247 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 CFBP00751 764 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 CLK2P49760 499 aaKnown RBP20.1■□□□□ 0.81
C9orf43-202ENST00000374165 GALNT17Q6IS24 598 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 PIK3AP1Q6ZUJ8 805 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 ABCB11O95342 1321 aa20.1■□□□□ 0.81
C9orf43-202ENST00000374165 WNT7AO00755 349 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 TOB1P50616 345 aaPredicted RBP20.09■□□□□ 0.81
C9orf43-202ENST00000374165 FAM177A1Q8N128 213 aaPredicted RBP20.09■□□□□ 0.81
C9orf43-202ENST00000374165 REXO1Q8N1G1 1221 aaKnown RBP20.09■□□□□ 0.81
C9orf43-202ENST00000374165 ANKRD13CQ8N6S4 541 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 MB21D1Q8N884 522 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 SPATC1LQ9H0A9 340 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 TFIP11Q9UBB9 837 aaKnown RBP20.09■□□□□ 0.81
C9orf43-202ENST00000374165 MRPL11Q9Y3B7 192 aaKnown RBP20.09■□□□□ 0.81
C9orf43-202ENST00000374165 MYH7BA7E2Y1 1941 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms