RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CD44P16070 742 aaKnown RBP22.16■■□□□ 1.14
HDAC1-201ENST00000373548 CUL4BQ13620 913 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 UBE2SQ16763 222 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 AGBL3Q8NEM8 1001 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 DPF2Q92785 391 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.16■■□□□ 1.14
HDAC1-201ENST00000373548 NFE2L3Q9Y4A8 694 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 MYH7BA7E2Y1 1941 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 NDUFB10O96000 172 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 CT47A1Q5JQC4 288 aaPredicted RBP22.15■■□□□ 1.14
HDAC1-201ENST00000373548 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 CUL5Q93034 780 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 AK8Q96MA6 479 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 IMPACTQ9P2X3 320 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 ATF5Q9Y2D1 282 aaPredicted RBP22.15■■□□□ 1.14
HDAC1-201ENST00000373548 CXCL9Q07325 125 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 RRAGBQ5VZM2 374 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 GMCL1Q96IK5 515 aa22.15■■□□□ 1.14
HDAC1-201ENST00000373548 NUP88Q99567 741 aaPredicted RBP22.15■■□□□ 1.14
HDAC1-201ENST00000373548 SERPINC1P01008 464 aa22.14■■□□□ 1.13
HDAC1-201ENST00000373548 ZNF18P17022 549 aa22.14■■□□□ 1.13
HDAC1-201ENST00000373548 MRPL12P52815 198 aaKnown RBP22.14■■□□□ 1.13
HDAC1-201ENST00000373548 UBASH3AP57075 661 aa22.14■■□□□ 1.13
HDAC1-201ENST00000373548 CDC37Q16543 378 aaPredicted RBP22.14■■□□□ 1.13
HDAC1-201ENST00000373548 TMC6Q7Z403 805 aa22.14■■□□□ 1.13
HDAC1-201ENST00000373548 MTMR14Q8NCE2 650 aa22.14■■□□□ 1.13
HDAC1-201ENST00000373548 TDP2O95551 362 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 TNNI2P48788 182 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 DALRD3Q5D0E6 543 aaKnown RBP22.13■■□□□ 1.13
HDAC1-201ENST00000373548 SMYD4Q8IYR2 804 aaPredicted RBP22.13■■□□□ 1.13
HDAC1-201ENST00000373548 RASSF8Q8NHQ8 419 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 NAP1L5Q96NT1 182 aaPredicted RBP22.13■■□□□ 1.13
HDAC1-201ENST00000373548 MTMR9Q96QG7 549 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 PSTPIP2Q9H939 334 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 A0A1W2PRG0 241 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 PPP1R3GB7ZBB8 358 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 CBFA2T2O43439 604 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 GSDMDP57764 484 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 LRRC15Q8TF66 581 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 VEZTQ9HBM0 779 aa22.13■■□□□ 1.13
HDAC1-201ENST00000373548 SLC37A4O43826 429 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 HSP90AA4PQ58FG1 418 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 FKBP1CQ5VVH2 108 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 CABP7Q86V35 215 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 PLIN2Q99541 437 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 PCDHA1Q9Y5I3 950 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 TECP42680 631 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 CALCRLQ16602 461 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 KLHL10Q6JEL2 608 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 IGSF22Q8N9C0 903 aa22.12■■□□□ 1.13
HDAC1-201ENST00000373548 ZBED3Q96IU2 234 aaPredicted RBP22.12■■□□□ 1.13
HDAC1-201ENST00000373548 RPN1P04843 607 aaKnown RBP22.11■■□□□ 1.13
HDAC1-201ENST00000373548 POLD1P28340 1107 aa22.11■■□□□ 1.13
HDAC1-201ENST00000373548 CDAN1Q8IWY9 1227 aa22.11■■□□□ 1.13
HDAC1-201ENST00000373548 MTFR1LQ9H019 292 aa22.11■■□□□ 1.13
HDAC1-201ENST00000373548 TAOK3Q9H2K8 898 aa22.11■■□□□ 1.13
HDAC1-201ENST00000373548 SAMSN1Q9NSI8 373 aaKnown RBP22.11■■□□□ 1.13
HDAC1-201ENST00000373548 SYNPO2Q9UMS6 1093 aa22.11■■□□□ 1.13
HDAC1-201ENST00000373548 SYNRGQ9UMZ2 1314 aa22.11■■□□□ 1.13
HDAC1-201ENST00000373548 PLCG1P19174 1290 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 TXKP42681 527 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 CCZ1BP86790 482 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 CCZ1P86791 482 aaPredicted RBP22.1■■□□□ 1.13
HDAC1-201ENST00000373548 MMTAG2Q9BU76 263 aaKnown RBP22.1■■□□□ 1.13
HDAC1-201ENST00000373548 TMEM39BQ9GZU3 492 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 INTS13Q9NVM9 706 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 KBTBD4Q9NVX7 518 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 BMP3P12645 472 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 SPATA1Q5VX52 437 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 CIAPIN1Q6FI81 312 aa22.1■■□□□ 1.13
HDAC1-201ENST00000373548 TMEM232C9JQI7 657 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 STX17P56962 302 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 SNAP25P60880 206 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 SYDE2Q5VT97 1194 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 PPP4R3AQ6IN85 833 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 GLT8D2Q9H1C3 349 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 RMND1Q9NWS8 449 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 R3HCC1Q9Y3T6 440 aaKnown RBP22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L15C9J2P7 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L13C9JLJ4 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L11C9JVI0 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L18D6R9N7 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L22D6RA61 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L17D6RBQ6 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L19D6RCP7 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L20D6RJB6 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 ECE1P42892 770 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 FXR2P51116 673 aaKnown RBP eCLIP22.09■■□□□ 1.133e-7■■□□□ 12.9
HDAC1-201ENST00000373548 USP17L24Q0WX57 530 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 ARMCX5Q6P1M9 558 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 USP17L6PQ6QN14 398 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 BTNL9Q6UXG8 535 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 FAM83AQ86UY5 434 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 CCDC125Q86Z20 511 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 CUEDC2Q9H467 287 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 ZBTB21Q9ULJ3 1066 aa22.09■■□□□ 1.13
HDAC1-201ENST00000373548 SHTN1A0MZ66 631 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 NFKBIEO00221 500 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 WNT10BO00744 389 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 SKILP12757 684 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms