RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 CCDC144CPQ8IYA2 1237 aa21.31■■□□□ 1
PBX3-205ENST00000373492 FANCBQ8NB91 859 aa21.31■■□□□ 1
PBX3-205ENST00000373492 CHST13Q8NET6 341 aa21.31■■□□□ 1
PBX3-205ENST00000373492 LZTS2Q9BRK4 669 aa21.31■■□□□ 1
PBX3-205ENST00000373492 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.31■■□□□ 1
PBX3-205ENST00000373492 CPVLQ9H3G5 476 aa21.31■■□□□ 1
PBX3-205ENST00000373492 RBM28Q9NW13 759 aaKnown RBP21.31■■□□□ 1
PBX3-205ENST00000373492 BRPF3Q9ULD4 1205 aa21.31■■□□□ 1
PBX3-205ENST00000373492 SGPL1O95470 568 aa21.3■■□□□ 1
PBX3-205ENST00000373492 IGHA2P01877 340 aa21.3■■□□□ 1
PBX3-205ENST00000373492 ICAM1P05362 532 aa21.3■■□□□ 1
PBX3-205ENST00000373492 CACNB2Q08289 660 aaPredicted RBP21.3■■□□□ 1
PBX3-205ENST00000373492 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
PBX3-205ENST00000373492 TKFCQ3LXA3 575 aa21.3■■□□□ 1
PBX3-205ENST00000373492 RAB11FIP4Q86YS3 637 aa21.3■■□□□ 1
PBX3-205ENST00000373492 U2AF1L4Q8WU68 220 aaKnown RBP21.3■■□□□ 1
PBX3-205ENST00000373492 VAT1LQ9HCJ6 419 aa21.3■■□□□ 1
PBX3-205ENST00000373492 FLRT1Q9NZU1 646 aa21.3■■□□□ 1
PBX3-205ENST00000373492 CCPG1Q9ULG6 757 aa21.3■■□□□ 1
PBX3-205ENST00000373492 DIS3Q9Y2L1 958 aaKnown RBP21.3■■□□□ 1
PBX3-205ENST00000373492 ZNF536O15090 1300 aa21.29■■□□□ 1
PBX3-205ENST00000373492 MCM3APO60318 1980 aa21.29■■□□□ 1
PBX3-205ENST00000373492 GOLGA8AA7E2F4 631 aa21.29■■□□□ 1
PBX3-205ENST00000373492 GOLGA8BA8MQT2 603 aa21.29■■□□□ 1
PBX3-205ENST00000373492 PPP2R5BQ15173 497 aa21.29■■□□□ 1
PBX3-205ENST00000373492 ANKRD1Q15327 319 aa21.29■■□□□ 1
PBX3-205ENST00000373492 CDC37Q16543 378 aaPredicted RBP21.29■■□□□ 1
PBX3-205ENST00000373492 RTN1Q16799 776 aa21.29■■□□□ 1
PBX3-205ENST00000373492 AGBL1Q96MI9 1066 aa21.29■■□□□ 1
PBX3-205ENST00000373492 ALDH8A1Q9H2A2 487 aaPredicted RBP21.29■■□□□ 1
PBX3-205ENST00000373492 JMJD4Q9H9V9 463 aa21.29■■□□□ 1
PBX3-205ENST00000373492 LCTP09848 1927 aa21.28■■□□□ 1
PBX3-205ENST00000373492 ALAS1P13196 640 aa21.28■■□□□ 1
PBX3-205ENST00000373492 SMARCA1P28370 1054 aa21.28■■□□□ 1
PBX3-205ENST00000373492 METAP2P50579 478 aaKnown RBP eCLIP21.28■■□□□ 1
PBX3-205ENST00000373492 NEK4P51957 841 aa21.28■■□□□ 1
PBX3-205ENST00000373492 DEFB118Q96PH6 123 aa21.28■■□□□ 1
PBX3-205ENST00000373492 RIOX1Q9H6W3 641 aa21.28■■□□□ 1
PBX3-205ENST00000373492 CCDC196A0A1B0GTZ2 297 aa21.27■■□□□ 1
PBX3-205ENST00000373492 EVCP57679 992 aa21.27■■□□□ 1
PBX3-205ENST00000373492 ZNF792Q3KQV3 632 aa21.27■■□□□ 1
PBX3-205ENST00000373492 SHISA4Q96DD7 197 aa21.27■■□□□ 1
PBX3-205ENST00000373492 MAML3Q96JK9 1138 aa21.27■■□□□ 1
PBX3-205ENST00000373492 SPZ1Q9BXG8 430 aa21.27■■□□□ 1
PBX3-205ENST00000373492 CRISPLD2Q9H0B8 497 aa21.27■■□□□ 1
PBX3-205ENST00000373492 HOMER2Q9NSB8 354 aa21.27■■□□□ 1
PBX3-205ENST00000373492 PGK2P07205 417 aa21.26■□□□□ 0.99
PBX3-205ENST00000373492 QRICH1Q2TAL8 776 aa21.26■□□□□ 0.99
PBX3-205ENST00000373492 HOMER1Q86YM7 354 aa21.26■□□□□ 0.99
PBX3-205ENST00000373492 DDX11Q96FC9 970 aa21.26■□□□□ 0.99
PBX3-205ENST00000373492 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
PBX3-205ENST00000373492 TRERF1Q96PN7 1200 aa21.26■□□□□ 0.99
PBX3-205ENST00000373492 ACAD9Q9H845 621 aa21.26■□□□□ 0.99
PBX3-205ENST00000373492 RNF146Q9NTX7 359 aa21.26■□□□□ 0.99
PBX3-205ENST00000373492 NID2Q14112 1375 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 DNAJC25-GNG10A0A024R161 153 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 ZBTB5O15062 677 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 PLEKHA8P1O95397 391 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 TFRCP02786 760 aaKnown RBP21.25■□□□□ 0.99
PBX3-205ENST00000373492 CYP2C19P33261 490 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 TRAF1Q13077 416 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 TMTC3Q6ZXV5 915 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 FBXO11Q86XK2 927 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 ANKRD35Q8N283 1001 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
PBX3-205ENST00000373492 MTMR8Q96EF0 704 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 RRP36Q96EU6 259 aaKnown RBP21.25■□□□□ 0.99
PBX3-205ENST00000373492 TBC1D32Q96NH3 1257 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 AMNQ9BXJ7 453 aa21.25■□□□□ 0.99
PBX3-205ENST00000373492 SEC63Q9UGP8 760 aaKnown RBP21.25■□□□□ 0.99
PBX3-205ENST00000373492 CYTH3O43739 400 aa21.24■□□□□ 0.99
PBX3-205ENST00000373492 PDIA3P30101 505 aaKnown RBP21.24■□□□□ 0.99
PBX3-205ENST00000373492 CCND3P30281 292 aaPredicted RBP21.24■□□□□ 0.99
PBX3-205ENST00000373492 AK2P54819 239 aa21.24■□□□□ 0.99
PBX3-205ENST00000373492 USH1GQ495M9 461 aa21.24■□□□□ 0.99
PBX3-205ENST00000373492 SRBD1Q8N5C6 995 aaKnown RBP21.24■□□□□ 0.99
PBX3-205ENST00000373492 PIGSQ96S52 555 aa21.24■□□□□ 0.99
PBX3-205ENST00000373492 ABCB11O95342 1321 aa21.24■□□□□ 0.99
PBX3-205ENST00000373492 PNMA6FA0A0J9YX94 578 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 CDC27P30260 824 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 RABEP1Q15276 862 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 CMTR1Q8N1G2 835 aaKnown RBP21.23■□□□□ 0.99
PBX3-205ENST00000373492 CCDC82Q8N4S0 544 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 IL27Q8NEV9 243 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 PIBF1Q8WXW3 757 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 KIF2CQ99661 725 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 LARP6Q9BRS8 491 aaKnown RBP21.23■□□□□ 0.99
PBX3-205ENST00000373492 TINF2Q9BSI4 451 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 NRBP1Q9UHY1 535 aa21.23■□□□□ 0.99
PBX3-205ENST00000373492 MKI67P46013 3256 aaKnown RBP21.22■□□□□ 0.99
PBX3-205ENST00000373492 MSCO60682 206 aa21.22■□□□□ 0.99
PBX3-205ENST00000373492 CYBAP13498 195 aa21.22■□□□□ 0.99
PBX3-205ENST00000373492 CCT2P78371 535 aaKnown RBP21.22■□□□□ 0.99
PBX3-205ENST00000373492 SLC35G1Q2M3R5 365 aa21.22■□□□□ 0.99
PBX3-205ENST00000373492 UBE2Q1Q7Z7E8 422 aa21.22■□□□□ 0.99
PBX3-205ENST00000373492 ZNF467Q7Z7K2 595 aaPredicted RBP21.22■□□□□ 0.99
PBX3-205ENST00000373492 ANKLE1Q8NAG6 615 aa21.22■□□□□ 0.99
PBX3-205ENST00000373492 OGDHLQ9ULD0 1010 aa21.22■□□□□ 0.99
PBX3-205ENST00000373492 PFASO15067 1338 aa21.22■□□□□ 0.99
PBX3-205ENST00000373492 ADD1P35611 737 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms