RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 MNAT1P51948 309 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 PROM2Q8N271 834 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 P3H4Q92791 437 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 SYNCQ9H7C4 482 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 PUF60Q9UHX1 559 aaKnown RBP11.72□□□□□ -0.53
PGK1-201ENST00000373316 RWDD2AQ9UIY3 292 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 FGAP02671 866 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
PGK1-201ENST00000373316 ALCAMQ13740 583 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 PPP1R7Q15435 360 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 NCOA5Q9HCD5 579 aaKnown RBP11.72□□□□□ -0.53
PGK1-201ENST00000373316 LGSNQ5TDP6 509 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 ELOA2Q8IYF1 753 aaPredicted RBP11.72□□□□□ -0.53
PGK1-201ENST00000373316 LINC00301Q8NCQ3 95 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 ZMYND15Q9H091 742 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 ZSWIM4Q9H7M6 989 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 FYB2Q5VWT5 728 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 PAF1Q8N7H5 531 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
PGK1-201ENST00000373316 CDC23Q9UJX2 597 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
PGK1-201ENST00000373316 ARHGEF35A5YM69 484 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 SH2B2O14492 632 aaPredicted RBP11.71□□□□□ -0.53
PGK1-201ENST00000373316 SLFN14P0C7P3 912 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 GYG1P46976 350 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 PPP1R14CQ8TAE6 165 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 VPS16Q9H269 839 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 TYW1Q9NV66 732 aaKnown RBP11.71□□□□□ -0.53
PGK1-201ENST00000373316 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
PGK1-201ENST00000373316 UFL1O94874 794 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.54
PGK1-201ENST00000373316 KLHL30Q0D2K2 578 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 IFIH1Q9BYX4 1025 aaKnown RBP11.71□□□□□ -0.54
PGK1-201ENST00000373316 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.54
PGK1-201ENST00000373316 RIPOR2Q9Y4F9 1068 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.54
PGK1-201ENST00000373316 N4BP2Q86UW6 1770 aaPredicted RBP11.71□□□□□ -0.54
PGK1-201ENST00000373316 NUP98P52948 1817 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 APBA3O96018 575 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 CSF1RP07333 972 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 MCAMP43121 646 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 ZNF658Q5TYW1 1059 aaPredicted RBP11.71□□□□□ -0.54
PGK1-201ENST00000373316 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 SRGAP1Q7Z6B7 1085 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.54
PGK1-201ENST00000373316 RSRC1Q96IZ7 334 aaKnown RBP11.71□□□□□ -0.54
PGK1-201ENST00000373316 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 SPTLC3Q9NUV7 552 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 PCDHA4Q9UN74 947 aa11.71□□□□□ -0.54
PGK1-201ENST00000373316 LARGE1O95461 756 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 RPN1P04843 607 aaKnown RBP11.7□□□□□ -0.54
PGK1-201ENST00000373316 RHOXF2BP0C7M4 288 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 MCF2L2Q86YR7 1114 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 RHOXF2Q9BQY4 288 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 AATFQ9NY61 560 aaKnown RBP eCLIP11.7□□□□□ -0.542e-18■■■■□ 24.9
PGK1-201ENST00000373316 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 TNKSO95271 1327 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 ELF2Q15723 593 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 TSC1Q92574 1164 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 USH1CQ9Y6N9 552 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 MMP1P03956 469 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 GTF2A1P52655 376 aaPredicted RBP11.7□□□□□ -0.54
PGK1-201ENST00000373316 AOC3Q16853 763 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 GSTA5Q7RTV2 222 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
PGK1-201ENST00000373316 TMX1Q9H3N1 280 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 HAUS2Q9NVX0 235 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
PGK1-201ENST00000373316 OTUD6AQ7L8S5 288 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 FBF1Q8TES7 1133 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 AMFRQ9UKV5 643 aa11.7□□□□□ -0.54
PGK1-201ENST00000373316 SMIM22K7EJ46 135 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 M0R2C6 588 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 RASSF2P50749 326 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 STRN3Q13033 797 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 FNBP1Q96RU3 617 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 BCAP29Q9UHQ4 241 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 MRPL11Q9Y3B7 192 aaKnown RBP11.69□□□□□ -0.54
PGK1-201ENST00000373316 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 THAP12O43422 761 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 TFAP4Q01664 338 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 POTEAQ6S8J7 498 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 CCDC151A5D8V7 595 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 GAS8O95995 478 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 CYP21A2P08686 494 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 COPB1P53618 953 aaKnown RBP11.69□□□□□ -0.54
PGK1-201ENST00000373316 LMNB2Q03252 620 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 GLE1Q53GS7 698 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 483.5 ms