RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 ERVK-9P63128 1117 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 ERVK-24P63145 666 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 PABPC4Q13310 644 aaKnown RBP eCLIP11.07□□□□□ -0.645e-12■■■■■ 29.3
ITM2A-201ENST00000373298 PLS1Q14651 629 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 RABEP1Q15276 862 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 NTRK3Q16288 839 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 RTN1Q16799 776 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
ITM2A-201ENST00000373298 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
ITM2A-201ENST00000373298 PHKBQ93100 1093 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 PIGSQ96S52 555 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 SAGE1Q9NXZ1 904 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 PLXNB2O15031 1838 aa11.07□□□□□ -0.64
ITM2A-201ENST00000373298 MKI67P46013 3256 aaKnown RBP11.06□□□□□ -0.64
ITM2A-201ENST00000373298 PLA2G6O60733 806 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 CTDNEP1O95476 244 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 PBX2P40425 430 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 LBX1P52954 281 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 QRICH1Q2TAL8 776 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 FAM160B2Q86V87 743 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 SHISA4Q96DD7 197 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 MTMR8Q96EF0 704 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 MAP3K14Q99558 947 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 BEGAINQ9BUH8 593 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 MOV10L1Q9BXT6 1211 aaKnown RBP11.06□□□□□ -0.64
ITM2A-201ENST00000373298 RANBP17Q9H2T7 1088 aaKnown RBP11.06□□□□□ -0.64
ITM2A-201ENST00000373298 RIOX1Q9H6W3 641 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 MORF4L1Q9UBU8 362 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 CNTNAP5Q8WYK1 1306 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 NID2Q14112 1375 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 ZNFX1Q9P2E3 1918 aaKnown RBP11.06□□□□□ -0.64
ITM2A-201ENST00000373298 DHX16O60231 1041 aaKnown RBP11.06□□□□□ -0.64
ITM2A-201ENST00000373298 PFKFB2O60825 505 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 CDC37Q16543 378 aaPredicted RBP11.06□□□□□ -0.64
ITM2A-201ENST00000373298 FAM110CQ1W6H9 321 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 GPRC5AQ8NFJ5 357 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 CD99L2Q8TCZ2 262 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 ZNF274Q96GC6 653 aaPredicted RBP11.06□□□□□ -0.64
ITM2A-201ENST00000373298 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 SPATC1LQ9H0A9 340 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 HOMER2Q9NSB8 354 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 RABGAP1Q9Y3P9 1069 aa11.06□□□□□ -0.64
ITM2A-201ENST00000373298 MYPNQ86TC9 1320 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 LCTP09848 1927 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 ADAMTS3O15072 1205 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 STAT3P40763 770 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 GCLCP48506 637 aaPredicted RBP11.05□□□□□ -0.64
ITM2A-201ENST00000373298 LACTBP83111 547 aaPredicted RBP11.05□□□□□ -0.64
ITM2A-201ENST00000373298 USH1GQ495M9 461 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 SNRNP48Q6IEG0 339 aaKnown RBP11.05□□□□□ -0.64
ITM2A-201ENST00000373298 SYNE3Q6ZMZ3 975 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 AIFM3Q96NN9 605 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
ITM2A-201ENST00000373298 OPLAHO14841 1288 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 JAK2O60674 1132 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 CALM1P0DP23 149 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 CALM2P0DP24 149 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 CALM3P0DP25 149 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 ERCC3P19447 782 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 KIF5BP33176 963 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 SP3Q02447 781 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 PKN1Q16512 942 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 TYW1BQ6NUM6 668 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 TBC1D5Q92609 795 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 GPKOWQ92917 476 aaPredicted RBP eCLIP11.04□□□□□ -0.64
ITM2A-201ENST00000373298 GTF3C6Q969F1 213 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 COA7Q96BR5 231 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
ITM2A-201ENST00000373298 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
ITM2A-201ENST00000373298 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
ITM2A-201ENST00000373298 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
ITM2A-201ENST00000373298 V9GY48 417 aaPredicted RBP11.04□□□□□ -0.64
ITM2A-201ENST00000373298 NFIBO00712 420 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 ZBED4O75132 1171 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 ICAM1P05362 532 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 ALAS1P13196 640 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 PSMC4P43686 418 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 ANKRD1Q15327 319 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 WDR78Q5VTH9 848 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 CLEC4DQ8WXI8 215 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 TMX3Q96JJ7 454 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 TEX13BQ9BXU2 312 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 GJB4Q9NTQ9 266 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 CCPG1Q9ULG6 757 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 GABRQQ9UN88 632 aa11.03□□□□□ -0.64
ITM2A-201ENST00000373298 ATP2A1O14983 1001 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 ZBTB5O15062 677 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 FKTNO75072 461 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 PGK2P07205 417 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 FDPSP14324 419 aaKnown RBP11.02□□□□□ -0.64
ITM2A-201ENST00000373298 RCAN1P53805 252 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 NCAPG2Q86XI2 1143 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 RIOX2Q8IUF8 465 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 MB21D1Q8N884 522 aa11.02□□□□□ -0.64
ITM2A-201ENST00000373298 NSUN7Q8NE18 718 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms