RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 BASP1P80723 227 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 DNM1Q05193 864 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 PICALMQ13492 652 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 IFI16Q16666 785 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 SELENOOQ9BVL4 669 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 DAAM1Q9Y4D1 1078 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 SYKP43405 635 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 DEUP1Q05D60 604 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 HSP90AA4PQ58FG1 418 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 RABGGTAQ92696 567 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 UTP6Q9NYH9 597 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 MED23Q9ULK4 1368 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 NOP2P46087 812 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 NME8Q8N427 588 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 CCDC63Q8NA47 563 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 MPHOSPH6Q99547 160 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 RASSF2P50749 326 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 KRT83P78385 493 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ST13P4Q8IZP2 240 aaPredicted RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 CLSTN2Q9H4D0 955 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 DACT1Q9NYF0 836 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ABCC12Q96J65 1359 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ACTN3Q08043 901 aaPredicted RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 ATL3Q6DD88 541 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 CALM1P0DP23 149 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 CALM2P0DP24 149 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 CALM3P0DP25 149 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 CCDC197Q8NCU1 140 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 TMEM87BQ96K49 555 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 CCDC68Q9H2F9 335 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 MYH15Q9Y2K3 1946 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ZNF189O75820 626 aaPredicted RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 ABCD1P33897 745 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 MTIF2P46199 727 aaKnown RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 ME3Q16798 604 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 PPARAQ07869 468 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 SLC27A3Q5K4L6 730 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ZNF653Q96CK0 615 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ARHGEF1Q92888 912 aaKnown RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 TSG101Q99816 390 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 CCDC88AQ3V6T2 1871 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 SEMA3EO15041 775 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 INTS5Q6P9B9 1019 aaKnown RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 SRLQ86TD4 932 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 C2CD5Q86YS7 1000 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 MAP7D3Q8IWC1 876 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 TXLNGQ9NUQ3 528 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 PRDM4Q9UKN5 801 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 NWD2Q9ULI1 1742 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 SERPINB2P05120 415 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 RBM6P78332 1123 aaKnown RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 NLGN1Q8N2Q7 840 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 TBC1D22AQ8WUA7 517 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 KLHL14Q9P2G3 628 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 TTF2Q9UNY4 1162 aaKnown RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 PDHA1P08559 390 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 ATP2B4P23634 1241 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 CYP2C19P33261 490 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 UBE3CQ15386 1083 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 MAP3K21Q5TCX8 1036 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 DYDC2Q96IM9 177 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 PFDN4Q9NQP4 134 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 HDAC9Q9UKV0 1011 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 WWC3Q9ULE0 1092 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 KRT71Q3SY84 523 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 CCDC25Q86WR0 208 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 ANTXR1Q9H6X2 564 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 PIH1D3Q9NQM4 214 aaKnown RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 ANKRD36CQ5JPF3 1778 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 CCDC194A0A1B0GVG4 234 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 RXRAP19793 462 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 TPP2P29144 1249 aaPredicted RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 ADD2P35612 726 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 ADCK5Q3MIX3 580 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 MFSD14BQ5SR56 506 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 ATP2A3Q93084 1043 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 KCPQ6ZWJ8 1503 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 MYH9P35579 1960 aaKnown RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 I3L4J1 428 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 RC3H1Q5TC82 1133 aaKnown RBP7.25□□□□□ -1.25
CHD6-203ENST00000373233 ZKSCAN3Q9BRR0 538 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 FAM169AQ9Y6X4 670 aa7.25□□□□□ -1.25
CHD6-203ENST00000373233 TAOK1Q7L7X3 1001 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 BRAPQ7Z569 592 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 PARP9Q8IXQ6 854 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 ZNF280CQ8ND82 737 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 FBXO18Q8NFZ0 1043 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 SH2D4AQ9H788 454 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 TPCN1Q9ULQ1 816 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 EVI5O60447 810 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 ATP2A2P16615 1042 aaKnown RBP7.24□□□□□ -1.25
CHD6-203ENST00000373233 SCP2P22307 547 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 RFX5P48382 616 aaPredicted RBP7.24□□□□□ -1.25
CHD6-203ENST00000373233 TRIML1Q8N9V2 468 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 ALDH1B1P30837 517 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 B4GALNT2Q8NHY0 566 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 PLCB1Q9NQ66 1216 aa7.24□□□□□ -1.25
CHD6-203ENST00000373233 CDC25BP30305 580 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms