RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 SNX27Q96L92 541 aa18.82■□□□□ 0.6
TRAPPC3-203ENST00000373163 UIMC1Q96RL1 719 aa18.82■□□□□ 0.6
TRAPPC3-203ENST00000373163 NYAP2Q9P242 653 aa18.82■□□□□ 0.6
TRAPPC3-203ENST00000373163 EXOC6BQ9Y2D4 811 aa18.82■□□□□ 0.6
TRAPPC3-203ENST00000373163 Q9Y3F1 56 aa18.82■□□□□ 0.6
TRAPPC3-203ENST00000373163 PRRC2BQ5JSZ5 2229 aaKnown RBP18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 TNKSO95271 1327 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 SOWAHBA6NEL2 793 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 RFC2P35250 354 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 ADD2P35612 726 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 CTR9Q6PD62 1173 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 GJD3Q8N144 294 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 ACAD9Q9H845 621 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 IL1RAPL2Q9NP60 686 aa18.81■□□□□ 0.6
TRAPPC3-203ENST00000373163 IQSEC1Q6DN90 963 aa18.8■□□□□ 0.6
TRAPPC3-203ENST00000373163 SPRED2Q7Z698 418 aa18.8■□□□□ 0.6
TRAPPC3-203ENST00000373163 A1CFQ9NQ94 594 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-203ENST00000373163 PDGFCQ9NRA1 345 aa18.8■□□□□ 0.6
TRAPPC3-203ENST00000373163 FEM1BQ9UK73 627 aa18.8■□□□□ 0.6
TRAPPC3-203ENST00000373163 ZBED9Q6R2W3 1325 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 MYH8P13535 1937 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 NHLH1Q02575 133 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 EEPD1Q7L9B9 569 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.65e-6■■■□□ 14.7
TRAPPC3-203ENST00000373163 UBE2ZQ9H832 354 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 LMCD1Q9NZU5 365 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 CLIP2Q9UDT6 1046 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 COG6Q9Y2V7 657 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 SLC4A4Q9Y6R1 1079 aa18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
TRAPPC3-203ENST00000373163 ALADP13716 330 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 RASA1P20936 1047 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 SSTR3P32745 418 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 CSPP1Q1MSJ5 1256 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 TMEM63BQ5T3F8 832 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 ZKSCAN2Q63HK3 967 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 GDPD5Q8WTR4 605 aa18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 ARPP21Q9UBL0 812 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-203ENST00000373163 IQCF3P0C7M6 154 aa18.77■□□□□ 0.6
TRAPPC3-203ENST00000373163 LEXMQ3ZCV2 418 aa18.77■□□□□ 0.6
TRAPPC3-203ENST00000373163 RETREG2Q8NC44 543 aa18.77■□□□□ 0.6
TRAPPC3-203ENST00000373163 MKNK2Q9HBH9 465 aa18.77■□□□□ 0.6
TRAPPC3-203ENST00000373163 RNF146Q9NTX7 359 aa18.77■□□□□ 0.6
TRAPPC3-203ENST00000373163 POLR3EQ9NVU0 708 aa18.77■□□□□ 0.6
TRAPPC3-203ENST00000373163 PAG1Q9NWQ8 432 aa18.77■□□□□ 0.6
TRAPPC3-203ENST00000373163 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 PITPNM1O00562 1244 aa18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 BAIAP3O94812 1187 aa18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 PURAQ00577 322 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 FAM47CQ5HY64 1035 aa18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 CEP85Q6P2H3 762 aa18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 STK11IPQ8N1F8 1099 aa18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 RHPN1Q8TCX5 695 aa18.76■□□□□ 0.59
TRAPPC3-203ENST00000373163 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 MCM3APO60318 1980 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 LCHNA4D1U4 455 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 CHGBP05060 677 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 IFIT2P09913 472 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 FDX1P10109 184 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 KCNA5P22460 613 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 KCNJ6P48051 423 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 HSP90AB4PQ58FF6 505 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 KIAA1211Q6ZU35 1233 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 CLASRPQ8N2M8 674 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 FBXL18Q96ME1 805 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 KCNH6Q9H252 994 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 VTA1Q9NP79 307 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 PIEZO1Q92508 2521 aa18.75■□□□□ 0.59
TRAPPC3-203ENST00000373163 ZNF536O15090 1300 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 MYL3P08590 195 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 IL9P15248 144 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 UBE3CQ15386 1083 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 TKFCQ3LXA3 575 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 DUSP28Q4G0W2 176 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 GMCL1P1Q8NEA9 526 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 TRERF1Q96PN7 1200 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 MTG1Q9BT17 334 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 GPHNQ9NQX3 736 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 SYNPO2Q9UMS6 1093 aa18.74■□□□□ 0.59
TRAPPC3-203ENST00000373163 COL4A4P53420 1690 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 GREB1LQ9C091 1923 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 BAZ2AQ9UIF9 1905 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 BMP3P12645 472 aa18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 CPT1AP50416 773 aa18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 BFSP2Q13515 415 aa18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 MKL1Q969V6 931 aa18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
TRAPPC3-203ENST00000373163 ZBED2Q9BTP6 218 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms