RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 JRKLQ9Y4A0 524 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 COL1A1P02452 1464 aaPredicted RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 TTC26A0AVF1 554 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 NUTM2BA6NNL0 878 aaPredicted RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 NUTM2EB1AL46 878 aaPredicted RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 LDHBP07195 334 aaKnown RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 VAV2P52735 878 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 TFAP4Q01664 338 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 MCM6Q14566 821 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 C15orf52Q6ZUT6 534 aaKnown RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 ZNF572Q7Z3I7 529 aaPredicted RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 ZSCAN29Q8IWY8 852 aaPredicted RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 SMYD4Q8IYR2 804 aaPredicted RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 CAGE1Q8TC20 777 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 SHISA4Q96DD7 197 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 RRP36Q96EU6 259 aaKnown RBP12.16□□□□□ -0.46
LCN2-202ENST00000372998 TSG101Q99816 390 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 ZMYND12Q9H0C1 365 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 GUCA1BQ9UMX6 200 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 PCDHA6Q9UN73 950 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 PCDHA8Q9Y5H6 950 aa12.16□□□□□ -0.46
LCN2-202ENST00000372998 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.46
LCN2-202ENST00000372998 PES1O00541 588 aaKnown RBP12.15□□□□□ -0.46
LCN2-202ENST00000372998 KLRC4O43908 158 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 TSPY3P0CV98 308 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 TSPY8P0CW00 308 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 LMAN1P49257 510 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 APBA1Q02410 837 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 PDE4DQ08499 809 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 ERFEQ4G0M1 354 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 GLE1Q53GS7 698 aaKnown RBP12.15□□□□□ -0.46
LCN2-202ENST00000372998 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 TPTE2Q6XPS3 522 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 GBP6Q6ZN66 633 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 SV2BQ7L1I2 683 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 PROM2Q8N271 834 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 MMGT1Q8N4V1 131 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 RNF10Q8N5U6 811 aaKnown RBP12.15□□□□□ -0.46
LCN2-202ENST00000372998 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
LCN2-202ENST00000372998 CCDC42Q96M95 316 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 PCMTD1Q96MG8 357 aaPredicted RBP12.15□□□□□ -0.46
LCN2-202ENST00000372998 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
LCN2-202ENST00000372998 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 PDE11AQ9HCR9 933 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 ST7Q9NRC1 585 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 VPS18Q9P253 973 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
LCN2-202ENST00000372998 SNAP23O00161 211 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 STXBP3O00186 592 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 OPA1O60313 960 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 GNA14O95837 355 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 RHOXF2BP0C7M4 288 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 CAPN2P17655 700 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 PAFAH1B1P43034 410 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 PDIA5Q14554 519 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 IL17AQ16552 155 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 MAN2A1Q16706 1144 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 MCTP2Q6DN12 878 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 IRF2BP1Q8IU81 584 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 CDK5RAP3Q96JB5 506 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 CNOT6LQ96LI5 555 aaKnown RBP12.14□□□□□ -0.47
LCN2-202ENST00000372998 PURBQ96QR8 312 aaKnown RBP12.14□□□□□ -0.47
LCN2-202ENST00000372998 PNKPQ96T60 521 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 SETDB2Q96T68 719 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 MTRQ99707 1265 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 RHOXF2Q9BQY4 288 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
LCN2-202ENST00000372998 TTYH3Q9C0H2 523 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 NHEJ1Q9H9Q4 299 aaPredicted RBP12.14□□□□□ -0.47
LCN2-202ENST00000372998 GDAQ9Y2T3 454 aa12.14□□□□□ -0.47
LCN2-202ENST00000372998 hCG_1642624A0A1W2PR95 340 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 LCA5LO95447 670 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 CASP1P29466 404 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
LCN2-202ENST00000372998 NAPAP54920 295 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 VSNL1P62760 191 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 ASIC1P78348 528 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 NNTQ13423 1086 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 ITPK1Q13572 414 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 PTPN21Q16825 1174 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 HEATR3Q7Z4Q2 680 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 GUF1Q8N442 669 aaKnown RBP12.13□□□□□ -0.47
LCN2-202ENST00000372998 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms