RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SPDYE16A6NNV3 312 aaPredicted RBP18.38■□□□□ 0.53
C9orf78-201ENST00000372447 CA12O43570 354 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 PLA2G6O60733 806 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 TRPA1O75762 1119 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 HERVK_113P62684 666 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
C9orf78-201ENST00000372447 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
C9orf78-201ENST00000372447 STK38Q15208 465 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 BTNL9Q6UXG8 535 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 PRPF38AQ8NAV1 312 aaKnown RBP18.38■□□□□ 0.53
C9orf78-201ENST00000372447 CTCFLQ8NI51 663 aaPredicted RBP18.38■□□□□ 0.53
C9orf78-201ENST00000372447 KCNG4Q8TDN1 519 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 CHURC1Q8WUH1 139 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 KIFC2Q96AC6 838 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 PARK7Q99497 189 aaKnown RBP18.38■□□□□ 0.53
C9orf78-201ENST00000372447 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 PCDHA7Q9UN72 937 aa18.38■□□□□ 0.53
C9orf78-201ENST00000372447 KLRF2D3W0D1 207 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 CRHR2Q13324 411 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 GNL2Q13823 731 aaKnown RBP18.37■□□□□ 0.53
C9orf78-201ENST00000372447 SMCR8Q8TEV9 937 aaPredicted RBP18.37■□□□□ 0.53
C9orf78-201ENST00000372447 ATG4CQ96DT6 458 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 DEXIO95424 95 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 U2AF2P26368 475 aaKnown RBP eCLIP18.37■□□□□ 0.53
C9orf78-201ENST00000372447 ADALQ6DHV7 355 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 CCDC73Q6ZRK6 1079 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 FAM160B2Q86V87 743 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 GOLPH3LQ9H4A5 285 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 ZFYVE28Q9HCC9 887 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 WBP1LQ9NX94 342 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 PRR12Q9ULL5 1215 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 ADAMTS5Q9UNA0 930 aa18.37■□□□□ 0.53
C9orf78-201ENST00000372447 SPTLC2O15270 562 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 PEX10O60683 326 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 TBC1D8O95759 1140 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 KIF5BP33176 963 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 SF3A1Q15459 793 aaKnown RBP18.36■□□□□ 0.53
C9orf78-201ENST00000372447 SLC35G1Q2M3R5 365 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
C9orf78-201ENST00000372447 JMYQ8N9B5 988 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 MYPNQ86TC9 1320 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 RLFQ13129 1914 aa18.36■□□□□ 0.53
C9orf78-201ENST00000372447 A0A1W2PQ27 194 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 A0A1W2PQ64 194 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 A0A1W2PQD8 194 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 VWA5AO00534 786 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 TLR2O60603 784 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 PLEKHA8P1O95397 391 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 TYRO3Q06418 890 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 SNW1Q13573 536 aaKnown RBP18.35■□□□□ 0.53
C9orf78-201ENST00000372447 SYDE2Q5VT97 1194 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 FSIP1Q8NA03 581 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
C9orf78-201ENST00000372447 RBPJLQ9UBG7 517 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 CYTH3O43739 400 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 FAM160A1Q05DH4 1040 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 SRBD1Q8N5C6 995 aaKnown RBP18.35■□□□□ 0.53
C9orf78-201ENST00000372447 ENGASEQ8NFI3 743 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 MRPS27Q92552 414 aaKnown RBP18.35■□□□□ 0.53
C9orf78-201ENST00000372447 CFHR5Q9BXR6 569 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 RNF26Q9BY78 433 aaPredicted RBP18.35■□□□□ 0.53
C9orf78-201ENST00000372447 TXNRD2Q9NNW7 524 aa18.35■□□□□ 0.53
C9orf78-201ENST00000372447 RRAGDQ9NQL2 400 aaPredicted RBP18.35■□□□□ 0.53
C9orf78-201ENST00000372447 CTAGE5O15320 804 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 MMP1P03956 469 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 SNAP25P60880 206 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 TMTC3Q6ZXV5 915 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 BEGAINQ9BUH8 593 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 VAT1LQ9HCJ6 419 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 BTBD7Q9P203 1132 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 CPA4Q9UI42 421 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 MRVI1Q9Y6F6 885 aa18.34■□□□□ 0.53
C9orf78-201ENST00000372447 CNMDO75829 334 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.53
C9orf78-201ENST00000372447 GNAQP50148 359 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 SLC39A14Q15043 492 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 SAFBQ15424 915 aaKnown RBP eCLIP18.33■□□□□ 0.53
C9orf78-201ENST00000372447 HS1BP3Q53T59 392 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 C17orf99Q6UX52 265 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 ANKRD13CQ8N6S4 541 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 REPS2Q8NFH8 660 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 RIOX1Q9H6W3 641 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 SLC38A10Q9HBR0 1119 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 SAGE1Q9NXZ1 904 aa18.33■□□□□ 0.53
C9orf78-201ENST00000372447 ESPNB1AK53 854 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 KINO60870 393 aaKnown RBP18.32■□□□□ 0.52
C9orf78-201ENST00000372447 AKAP17AQ02040 695 aaKnown RBP18.32■□□□□ 0.52
C9orf78-201ENST00000372447 Q3C1V9 767 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 GTF3C2Q8WUA4 911 aaPredicted RBP18.32■□□□□ 0.52
C9orf78-201ENST00000372447 LZTS2Q9BRK4 669 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 PAGR1Q9BTK6 254 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 RABGAP1Q9Y3P9 1069 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms