RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 CHURC1Q8WUH1 139 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 IFNKQ9P0W0 207 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 GOLGA8HP0CJ92 632 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
KDM4A-201ENST00000372396 FAN1Q9Y2M0 1017 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 CDC27P30260 824 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 CRKP46108 304 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 SLFN13Q68D06 897 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 CC2D1AQ6P1N0 951 aaPredicted RBP11.16□□□□□ -0.62
KDM4A-201ENST00000372396 NEK8Q86SG6 692 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 AIFM3Q96NN9 605 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 ZSWIM4Q9H7M6 989 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 SERTAD1Q9UHV2 236 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
KDM4A-201ENST00000372396 FRMPD2Q68DX3 1309 aaPredicted RBP11.16□□□□□ -0.62
KDM4A-201ENST00000372396 RGPD5Q99666 1765 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 LONP1P36776 959 aaKnown RBP11.16□□□□□ -0.62
KDM4A-201ENST00000372396 CALCRLQ16602 461 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 CCDC40Q4G0X9 1142 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 HAUS3Q68CZ6 603 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 B4GALNT4Q76KP1 1039 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 KLHL23Q8NBE8 558 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 MRFAP1Q9Y605 127 aa11.16□□□□□ -0.62
KDM4A-201ENST00000372396 CCT5P48643 541 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 BRD3Q15059 726 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 ENOX2Q16206 610 aaKnown RBP11.15□□□□□ -0.62
KDM4A-201ENST00000372396 FBXL16Q8N461 479 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 UBA5Q9GZZ9 404 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 LRWD1Q9UFC0 647 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 ECE2O60344 883 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 SNUPNO95149 360 aaKnown RBP11.15□□□□□ -0.62
KDM4A-201ENST00000372396 LONRF2Q1L5Z9 754 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 STYK1Q6J9G0 422 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 PICK1Q9NRD5 415 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 ARHGAP25P42331 645 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 TXKP42681 527 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 MPHOSPH6Q99547 160 aaKnown RBP11.15□□□□□ -0.62
KDM4A-201ENST00000372396 FTOQ9C0B1 505 aaKnown RBP eCLIP11.15□□□□□ -0.62
KDM4A-201ENST00000372396 SLIT2O94813 1529 aa11.15□□□□□ -0.62
KDM4A-201ENST00000372396 TCRBV5S4A2TA0A5A2 114 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 TCP10L2B9ZVM9 353 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 PLEKHA8P1O95397 391 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 GNG11P61952 73 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 INF2Q27J81 1249 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 CABP7Q86V35 215 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 FAM71BQ8TC56 605 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 BCS1LQ9Y276 419 aa11.15□□□□□ -0.63
KDM4A-201ENST00000372396 KIF4AO95239 1232 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 OR52Z1P0C646 297 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 PPP4CP60510 307 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 PTGDRQ13258 359 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 GRM4Q14833 912 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 CACNA2D4Q7Z3S7 1137 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 CLIC6Q96NY7 704 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 AGXT2Q9BYV1 514 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 FAM53CQ9NYF3 392 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 BIN2Q9UBW5 565 aaPredicted RBP11.14□□□□□ -0.63
KDM4A-201ENST00000372396 AFDNP55196 1824 aaKnown RBP11.14□□□□□ -0.63
KDM4A-201ENST00000372396 H7C1D1 291 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 NR5A1Q13285 461 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 PNOCQ13519 176 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 CNNM4Q6P4Q7 775 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 NEDD1Q8NHV4 660 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 MICAL1Q8TDZ2 1067 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 PSTPIP2Q9H939 334 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 PRDM16Q9HAZ2 1276 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 IMPACTQ9P2X3 320 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 RANBP1P43487 201 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 SPA17Q15506 151 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
KDM4A-201ENST00000372396 CPLX3Q8WVH0 158 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 PNMA2Q9UL42 364 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 SAMM50Q9Y512 469 aa11.14□□□□□ -0.63
KDM4A-201ENST00000372396 SRPRBQ9Y5M8 271 aaKnown RBP11.14□□□□□ -0.63
KDM4A-201ENST00000372396 CCT6AP40227 531 aaKnown RBP11.13□□□□□ -0.63
KDM4A-201ENST00000372396 STX17P56962 302 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 EN1Q05925 392 aaPredicted RBP11.13□□□□□ -0.63
KDM4A-201ENST00000372396 DCAF15Q66K64 600 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 CCDC65Q8IXS2 484 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 CAGE1Q8TC20 777 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 SPDL1Q96EA4 605 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 FAM169AQ9Y6X4 670 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 C21orf2O43822 256 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 KIF5CO60282 957 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 AP1G2O75843 785 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 FANCCQ00597 558 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 DALRD3Q5D0E6 543 aaKnown RBP11.13□□□□□ -0.63
KDM4A-201ENST00000372396 SALL1Q9NSC2 1324 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 SYNRGQ9UMZ2 1314 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 CCDC114Q96M63 670 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 PLIN2Q99541 437 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 RIOK1Q9BRS2 568 aaKnown RBP11.13□□□□□ -0.63
KDM4A-201ENST00000372396 FAM204AQ9H8W3 233 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 PIM2Q9P1W9 311 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms