RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 RPSAP08865 295 aaKnown RBP20.32■□□□□ 0.84
MMP9-201ENST00000372330 SCTRP47872 440 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 ITGB3BPQ13352 177 aaPredicted RBP20.32■□□□□ 0.84
MMP9-201ENST00000372330 LMBR1Q8WVP7 490 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 ITFG2Q969R8 447 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 PDE8AO60658 829 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 ANTXR2P58335 489 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 TRAF1Q13077 416 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 FAM210AQ96ND0 272 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 VPS16Q9H269 839 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 KIF9Q9HAQ2 790 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 PLCH1Q4KWH8 1693 aa20.32■□□□□ 0.84
MMP9-201ENST00000372330 A0A1W2PQC6 194 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 TCP1P17987 556 aaKnown RBP20.31■□□□□ 0.84
MMP9-201ENST00000372330 SAFBQ15424 915 aaKnown RBP eCLIP20.31■□□□□ 0.84
MMP9-201ENST00000372330 SH3RF1Q7Z6J0 888 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 CUL5Q93034 780 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 KDM4CQ9H3R0 1056 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 CAPN11Q9UMQ6 739 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 MYH7P12883 1935 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 AKAP11Q9UKA4 1901 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 ERVV-1B6SEH8 477 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 IARSP41252 1262 aaKnown RBP20.31■□□□□ 0.84
MMP9-201ENST00000372330 KIF5AQ12840 1032 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 RIPK1Q13546 671 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 EZH2Q15910 746 aaKnown RBP20.31■□□□□ 0.84
MMP9-201ENST00000372330 MEA1Q16626 185 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 TCP11X2Q5H9J9 407 aa20.31■□□□□ 0.84
MMP9-201ENST00000372330 CALR3Q96L12 384 aaKnown RBP20.31■□□□□ 0.84
MMP9-201ENST00000372330 CCDC43Q96MW1 224 aaKnown RBP20.31■□□□□ 0.84
MMP9-201ENST00000372330 ATRNO75882 1429 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 C4AP0C0L4 1744 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 TTC26A0AVF1 554 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 PPP1R12BO60237 982 aaPredicted RBP20.3■□□□□ 0.84
MMP9-201ENST00000372330 SNUPNO95149 360 aaKnown RBP20.3■□□□□ 0.84
MMP9-201ENST00000372330 ATP6V1G2O95670 118 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 WASF1Q92558 559 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 NOD2Q9HC29 1040 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 RWDD2AQ9UIY3 292 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 ANGEL1Q9UNK9 670 aaKnown RBP20.3■□□□□ 0.84
MMP9-201ENST00000372330 ANKRD36CQ5JPF3 1778 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 WNK3Q9BYP7 1800 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 PECAM1P16284 738 aaPredicted RBP20.3■□□□□ 0.84
MMP9-201ENST00000372330 IL6STP40189 918 aaPredicted RBP20.3■□□□□ 0.84
MMP9-201ENST00000372330 UBXN1Q04323 297 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 PAK2Q13177 524 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 UBE3CQ15386 1083 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 HAUS3Q68CZ6 603 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 MICAL1Q8TDZ2 1067 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 CPSF2Q9P2I0 782 aaKnown RBP20.3■□□□□ 0.84
MMP9-201ENST00000372330 UBN2Q6ZU65 1347 aa20.3■□□□□ 0.84
MMP9-201ENST00000372330 MYH3P11055 1940 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 C5orf60A6NFR6 353 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 BUB1BO60566 1050 aaPredicted RBP20.29■□□□□ 0.84
MMP9-201ENST00000372330 PRPHP41219 470 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 PAFAH1B1P43034 410 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 GRIN1Q05586 938 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 C8orf74Q6P047 294 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
MMP9-201ENST00000372330 RAB11FIP4Q86YS3 637 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 CACNA2D3Q8IZS8 1091 aa20.29■□□□□ 0.84
MMP9-201ENST00000372330 ZNHIT6Q9NWK9 470 aaKnown RBP20.29■□□□□ 0.84
MMP9-201ENST00000372330 GOLGA6L10A6NI86 522 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 KCNJ18B7U540 433 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 TACC1O75410 805 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 TOB1P50616 345 aaPredicted RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 DPYDQ12882 1025 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 KCNJ12Q14500 433 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 CAPRIN2Q6IMN6 1127 aaKnown RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 WDR59Q6PJI9 974 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 NSMCE1Q8WV22 266 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 PAGE5Q96GU1 130 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 PPANQ9NQ55 473 aaKnown RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 PIH1D3Q9NQM4 214 aaKnown RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 TBC1D2BQ9UPU7 963 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 STK36Q9NRP7 1315 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 LIN7AO14910 233 aaPredicted RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 IDH1O75874 414 aaKnown RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 ARID4AP29374 1257 aaPredicted RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 SLC7A5Q01650 507 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 CCDC181Q5TID7 509 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 FAM43BQ6ZT52 329 aaPredicted RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 KIRREL3Q8IZU9 778 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 SEC16BQ96JE7 1060 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 LACRTQ9GZZ8 138 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 FOXP1Q9H334 677 aaPredicted RBP20.28■□□□□ 0.84
MMP9-201ENST00000372330 GDF3Q9NR23 364 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 TRPC6Q9Y210 931 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 BCL9LQ86UU0 1499 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 SLIT2O94813 1529 aa20.28■□□□□ 0.84
MMP9-201ENST00000372330 MYO5AQ9Y4I1 1855 aaKnown RBP20.27■□□□□ 0.84
MMP9-201ENST00000372330 NUTM2BA6NNL0 878 aaPredicted RBP20.27■□□□□ 0.84
MMP9-201ENST00000372330 NUTM2EB1AL46 878 aaPredicted RBP20.27■□□□□ 0.84
MMP9-201ENST00000372330 SKAP2O75563 359 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms