RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 GPR162Q16538 588 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 LETM2Q2VYF4 491 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 LONRF3Q496Y0 759 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 KRBA2Q6ZNG9 492 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 RNF214Q8ND24 703 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 TMEM60Q9H2L4 133 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 KIAA1468Q9P260 1216 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 SCN4AP35499 1836 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 PARP14Q460N5 1801 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 PAPPA2Q9BXP8 1791 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 USP14P54578 494 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 UVSSAQ2YD98 709 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 NOL9Q5SY16 702 aaKnown RBP20.5■□□□□ 0.87
CD40-202ENST00000372285 ZKSCAN4Q969J2 545 aaPredicted RBP20.5■□□□□ 0.87
CD40-202ENST00000372285 DCPSQ96C86 337 aaKnown RBP20.5■□□□□ 0.87
CD40-202ENST00000372285 AS3MTQ9HBK9 375 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 PICK1Q9NRD5 415 aa20.5■□□□□ 0.87
CD40-202ENST00000372285 EDIL3O43854 480 aa20.49■□□□□ 0.87
CD40-202ENST00000372285 GRIN3BO60391 1043 aa20.49■□□□□ 0.87
CD40-202ENST00000372285 CCNT1O60563 726 aaKnown RBP20.49■□□□□ 0.87
CD40-202ENST00000372285 PTPRAP18433 802 aa20.49■□□□□ 0.87
CD40-202ENST00000372285 USP50Q70EL3 339 aaPredicted RBP20.49■□□□□ 0.87
CD40-202ENST00000372285 SYMPKQ92797 1274 aaKnown RBP20.49■□□□□ 0.87
CD40-202ENST00000372285 KIFC2Q96AC6 838 aa20.49■□□□□ 0.87
CD40-202ENST00000372285 EPSTI1Q96J88 318 aa20.49■□□□□ 0.87
CD40-202ENST00000372285 MEIS2O14770 477 aa20.48■□□□□ 0.87
CD40-202ENST00000372285 POLR2DO15514 142 aaKnown RBP20.48■□□□□ 0.87
CD40-202ENST00000372285 CAVIN2O95810 425 aa20.48■□□□□ 0.87
CD40-202ENST00000372285 AP3B2Q13367 1082 aa20.48■□□□□ 0.87
CD40-202ENST00000372285 USH1GQ495M9 461 aa20.48■□□□□ 0.87
CD40-202ENST00000372285 DTHD1Q6ZMT9 781 aa20.48■□□□□ 0.87
CD40-202ENST00000372285 FBXO28Q9NVF7 368 aa20.48■□□□□ 0.87
CD40-202ENST00000372285 USP17L15C9J2P7 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L13C9JLJ4 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L11C9JVI0 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L18D6R9N7 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L22D6RA61 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L17D6RBQ6 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L19D6RCP7 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L20D6RJB6 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 NEMFO60524 1076 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L24Q0WX57 530 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 STX1AQ16623 288 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 ANO6Q4KMQ2 910 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP17L6PQ6QN14 398 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 SULF1Q8IWU6 871 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 CNNM3Q8NE01 707 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 OPLAHO14841 1288 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP2O75604 605 aaPredicted RBP20.47■□□□□ 0.87
CD40-202ENST00000372285 OR52Z1P0C646 297 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 BACE1P56817 501 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 MDM2Q00987 491 aaPredicted RBP20.47■□□□□ 0.87
CD40-202ENST00000372285 MTMR2Q13614 643 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 PPP4R3AQ6IN85 833 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 KANK3Q6NY19 840 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 PRPF38AQ8NAV1 312 aaKnown RBP20.47■□□□□ 0.87
CD40-202ENST00000372285 ZNF280CQ8ND82 737 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.47■□□□□ 0.87
CD40-202ENST00000372285 FAM200AQ8TCP9 573 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 ZC3H15Q8WU90 426 aaKnown RBP20.47■□□□□ 0.87
CD40-202ENST00000372285 NAP1L4Q99733 375 aaKnown RBP20.47■□□□□ 0.87
CD40-202ENST00000372285 EMILIN3Q9NT22 766 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 USP25Q9UHP3 1055 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 SERTAD1Q9UHV2 236 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 OTOFQ9HC10 1997 aa20.47■□□□□ 0.87
CD40-202ENST00000372285 A0A087X0B3 334 aa20.46■□□□□ 0.87
CD40-202ENST00000372285 ACTN4O43707 911 aaKnown RBP20.46■□□□□ 0.87
CD40-202ENST00000372285 FOSP01100 380 aaPredicted RBP20.46■□□□□ 0.87
CD40-202ENST00000372285 SPP2Q13103 211 aa20.46■□□□□ 0.87
CD40-202ENST00000372285 SLF1Q9BQI6 1058 aa20.46■□□□□ 0.87
CD40-202ENST00000372285 PYM1Q9BRP8 204 aaKnown RBP20.46■□□□□ 0.87
CD40-202ENST00000372285 ANO10Q9NW15 660 aa20.46■□□□□ 0.87
CD40-202ENST00000372285 HOOK1Q9UJC3 728 aaKnown RBP20.46■□□□□ 0.87
CD40-202ENST00000372285 TUBE1Q9UJT0 475 aa20.46■□□□□ 0.87
CD40-202ENST00000372285 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
CD40-202ENST00000372285 GCFC2P16383 781 aaKnown RBP20.45■□□□□ 0.86
CD40-202ENST00000372285 CCDC174Q6PII3 467 aa20.45■□□□□ 0.86
CD40-202ENST00000372285 ERCC4Q92889 916 aaPredicted RBP20.45■□□□□ 0.86
CD40-202ENST00000372285 MTMR9Q96QG7 549 aa20.45■□□□□ 0.86
CD40-202ENST00000372285 ANO3Q9BYT9 981 aa20.45■□□□□ 0.86
CD40-202ENST00000372285 ADM5C9JUS6 153 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 VCAM1P19320 739 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 EPHX2P34913 555 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 USP11P51784 963 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 PDILTQ8N807 584 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 ANP32BQ92688 251 aaKnown RBP20.44■□□□□ 0.86
CD40-202ENST00000372285 C12orf42Q96LP6 360 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 AK8Q96MA6 479 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 RLFQ13129 1914 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 UTRNP46939 3433 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 ABCB11O95342 1321 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 C19orf81C9J6K1 198 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 TDP2O95551 362 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 SLFN14P0C7P3 912 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 KRT26Q7Z3Y9 468 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
CD40-202ENST00000372285 CRYGNQ8WXF5 182 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms