RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SEMA3FQ13275 785 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 KIAA1755Q5JYT7 1200 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 MFSD14CQ5VZR4 134 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 PLEKHH3Q7Z736 793 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
USP1-202ENST00000371146 IL17RBQ9NRM6 502 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 TJP1Q07157 1748 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 CNTNAP1P78357 1384 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 AFDNP55196 1824 aaKnown RBP8.02□□□□□ -1.13
USP1-202ENST00000371146 CXCL11O14625 94 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 CA12O43570 354 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 HARSP12081 509 aaKnown RBP8.02□□□□□ -1.13
USP1-202ENST00000371146 RCSD1Q6JBY9 416 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 CDK5RAP3Q96JB5 506 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 CCDC94Q9BW85 323 aaPredicted RBP8.02□□□□□ -1.13
USP1-202ENST00000371146 KIF3AQ9Y496 699 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 PPP2R3BQ9Y5P8 575 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 NUP188Q5SRE5 1749 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 RAD50Q92878 1312 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 PES1O00541 588 aaKnown RBP8.01□□□□□ -1.13
USP1-202ENST00000371146 UPP2O95045 317 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 MARCKSP29966 332 aaPredicted RBP8.01□□□□□ -1.13
USP1-202ENST00000371146 CDC25AP30304 524 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 TXKP42681 527 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 NFX1Q12986 1120 aaKnown RBP8.01□□□□□ -1.13
USP1-202ENST00000371146 INF2Q27J81 1249 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 APOA5Q6Q788 366 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 RUFY3Q7L099 469 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 TMTC2Q8N394 836 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 ERO1AQ96HE7 468 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 MTUS1Q9ULD2 1270 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 AGTPBP1Q9UPW5 1226 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 MAP1BP46821 2468 aaKnown RBP8.01□□□□□ -1.13
USP1-202ENST00000371146 GCOM1H8Y6P7 765 aaPredicted RBP8.01□□□□□ -1.13
USP1-202ENST00000371146 TLR2O60603 784 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 SLC10A3P09131 477 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 POLR2MP0CAP2 368 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 RPS6KB1P23443 525 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 RPS6P62753 249 aaKnown RBP8.01□□□□□ -1.13
USP1-202ENST00000371146 SKIV2LQ15477 1246 aaKnown RBP8.01□□□□□ -1.13
USP1-202ENST00000371146 OTUD6BQ8N6M0 293 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 TSPYL1Q9H0U9 437 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 BTBD7Q9P203 1132 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 LIMCH1Q9UPQ0 1083 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 SHANK3Q9BYB0 1731 aa8.01□□□□□ -1.13
USP1-202ENST00000371146 SPDYE4A6NLX3 237 aa8□□□□□ -1.13
USP1-202ENST00000371146 MAP2K2P36507 400 aa8□□□□□ -1.13
USP1-202ENST00000371146 SATB1Q01826 763 aa8□□□□□ -1.13
USP1-202ENST00000371146 COPS5Q92905 334 aa8□□□□□ -1.13
USP1-202ENST00000371146 FTOQ9C0B1 505 aaKnown RBP eCLIP8□□□□□ -1.131e-8■□□□□ 10.2
USP1-202ENST00000371146 ABCB11O95342 1321 aa8□□□□□ -1.13
USP1-202ENST00000371146 KNL1Q8NG31 2342 aa8□□□□□ -1.13
USP1-202ENST00000371146 ESPNB1AK53 854 aa8□□□□□ -1.13
USP1-202ENST00000371146 PDHBP11177 359 aa8□□□□□ -1.13
USP1-202ENST00000371146 GJB2P29033 226 aa8□□□□□ -1.13
USP1-202ENST00000371146 GNAQP50148 359 aa8□□□□□ -1.13
USP1-202ENST00000371146 MRPL12P52815 198 aaKnown RBP8□□□□□ -1.13
USP1-202ENST00000371146 FKBP1BP68106 108 aa8□□□□□ -1.13
USP1-202ENST00000371146 BRDTQ58F21 947 aaPredicted RBP8□□□□□ -1.13
USP1-202ENST00000371146 MUM1L1Q5H9M0 696 aa8□□□□□ -1.13
USP1-202ENST00000371146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8□□□□□ -1.13
USP1-202ENST00000371146 MCOLN1Q9GZU1 580 aa8□□□□□ -1.13
USP1-202ENST00000371146 NBPF3Q9H094 633 aa8□□□□□ -1.13
USP1-202ENST00000371146 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
USP1-202ENST00000371146 COL4A1P02462 1669 aa8□□□□□ -1.13
USP1-202ENST00000371146 COL4A5P29400 1685 aa8□□□□□ -1.13
USP1-202ENST00000371146 TXNP10599 105 aaKnown RBP8□□□□□ -1.13
USP1-202ENST00000371146 INHBEP58166 350 aa8□□□□□ -1.13
USP1-202ENST00000371146 NR5A1Q13285 461 aa8□□□□□ -1.13
USP1-202ENST00000371146 TMEM132BQ14DG7 1078 aa8□□□□□ -1.13
USP1-202ENST00000371146 TMEM87AQ8NBN3 555 aa8□□□□□ -1.13
USP1-202ENST00000371146 TAAR1Q96RJ0 339 aa8□□□□□ -1.13
USP1-202ENST00000371146 MPHOSPH6Q99547 160 aaKnown RBP8□□□□□ -1.13
USP1-202ENST00000371146 ACAD9Q9H845 621 aa8□□□□□ -1.13
USP1-202ENST00000371146 C6orf50Q9HD87 102 aa8□□□□□ -1.13
USP1-202ENST00000371146 TPCN1Q9ULQ1 816 aa8□□□□□ -1.13
USP1-202ENST00000371146 TMX2Q9Y320 296 aa8□□□□□ -1.13
USP1-202ENST00000371146 AFG3L2Q9Y4W6 797 aa8□□□□□ -1.13
USP1-202ENST00000371146 SALL1Q9NSC2 1324 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 WDR46O15213 610 aaKnown RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 CCNT1O60563 726 aaKnown RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 CDKL5O76039 1030 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 LARGE1O95461 756 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 CDC27P30260 824 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 GUCY1A2P33402 732 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 GPR142Q7Z601 462 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 DEFB128Q7Z7B8 93 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 BICD2Q8TD16 824 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 ZNF512BQ96KM6 892 aaPredicted RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 MRPL11Q9Y3B7 192 aaKnown RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 TNRC6CQ9HCJ0 1690 aaKnown RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 SPDYE16A6NNV3 312 aaPredicted RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 IDEP14735 1019 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 ADCYAP1R1P41586 468 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 STK38Q15208 465 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 ANKRD1Q15327 319 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 ME3Q16798 604 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms