RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 MFAP1P55081 439 aaKnown RBP12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 ANKS1AQ92625 1134 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 ESR2Q92731 530 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 PDGFCQ9NRA1 345 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 CCPG1Q9ULG6 757 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 CNPY2Q9Y2B0 182 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 ATP11BQ9Y2G3 1177 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 RBM19Q9Y4C8 960 aaKnown RBP12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 KBTBD13C9JR72 458 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 HIP1O00291 1037 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 ITGB8P26012 769 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 BAATQ14032 418 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 COL9A3Q14050 684 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 RNF41Q9H4P4 317 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 FAM184BQ9ULE4 1060 aa12.92□□□□□ -0.34
EXOSC1-202ENST00000370885 A0A1W2PPC1 479 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 A0A1W2PQ45 241 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 A0A1W2PQY0 241 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 CYP21A2P08686 494 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 TLE2Q04725 743 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 KCNA10Q16322 511 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 TAPT1Q6NXT6 567 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 NSMFQ6X4W1 530 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 TBC1D5Q92609 795 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 ZSCAN10Q96SZ4 725 aaPredicted RBP12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 PDLIM7Q9NR12 457 aa12.91□□□□□ -0.34
EXOSC1-202ENST00000370885 DUSP11O75319 330 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 ACLYP53396 1101 aa12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 SEC23AQ15436 765 aa12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 C1orf53Q5VUE5 145 aa12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 EEPD1Q7L9B9 569 aa12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 MORC4Q8TE76 937 aa12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 UPF3AQ9H1J1 476 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-202ENST00000370885 TNKSO95271 1327 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 SGSM2O43147 1006 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 SMPD1P17405 629 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 GJA9P57773 515 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 BEX3Q00994 111 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 RNF180Q86T96 592 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 FBXO16Q8IX29 292 aaPredicted RBP12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 TDHQ8IZJ6 230 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 STAG2Q8N3U4 1231 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 CTNNA3Q9UI47 895 aa12.89□□□□□ -0.35
EXOSC1-202ENST00000370885 ASGR1P07306 291 aa12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 C6orf222P0C671 652 aaPredicted RBP12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 EPHB4P54760 987 aa12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 NKX3-2P78367 333 aa12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 C9orf50Q5SZB4 431 aa12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 ADGRF4Q8IZF3 695 aa12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 BADQ92934 168 aa12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 TSEN34Q9BSV6 310 aaKnown RBP12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 RAD50Q92878 1312 aa12.88□□□□□ -0.35
EXOSC1-202ENST00000370885 ASB14A6NK59 587 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 PQBP1O60828 265 aaKnown RBP12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 CALML3P27482 149 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 CDK7P50613 346 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 ALDH5A1P51649 535 aaPredicted RBP12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 ANTXR2P58335 489 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 FAAP100Q0VG06 881 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 LRIT3Q3SXY7 679 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 USH1GQ495M9 461 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 KRT23Q9C075 422 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 KAT14Q9H8E8 782 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 JMJD4Q9H9V9 463 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 PRDM5Q9NQX1 630 aaPredicted RBP12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 COL20A1Q9P218 1284 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
EXOSC1-202ENST00000370885 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
EXOSC1-202ENST00000370885 E7EWF7 191 aa12.86□□□□□ -0.35
EXOSC1-202ENST00000370885 OPLAHO14841 1288 aa12.86□□□□□ -0.35
EXOSC1-202ENST00000370885 PPP1R11O60927 126 aaPredicted RBP12.86□□□□□ -0.35
EXOSC1-202ENST00000370885 SHHQ15465 462 aa12.86□□□□□ -0.35
EXOSC1-202ENST00000370885 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
EXOSC1-202ENST00000370885 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
EXOSC1-202ENST00000370885 GNASQ5JWF2 1037 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms