RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SLC1A4P43007 532 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 STAT2P52630 851 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 ACLYP53396 1101 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 SMAD3P84022 425 aaKnown RBP17.79■□□□□ 0.44
SS18L1-202ENST00000370848 FAM160B2Q86V87 743 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 FAM133AQ8N9E0 248 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 BADQ92934 168 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 FERMT2Q96AC1 680 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 KIFC2Q96AC6 838 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 KRT23Q9C075 422 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 LCTP09848 1927 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 ELP1O95163 1332 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 TNKSO95271 1327 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 FRMPD2Q68DX3 1309 aaPredicted RBP17.78■□□□□ 0.44
SS18L1-202ENST00000370848 SLC27A2O14975 620 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 ADCY6O43306 1168 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 ITGB8P26012 769 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 GJA9P57773 515 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 ACVR2BQ13705 512 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 SHHQ15465 462 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 CCDC96Q2M329 555 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 TKFCQ3LXA3 575 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 C9orf50Q5SZB4 431 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 CASC1Q6TDU7 716 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 ENAHQ8N8S7 591 aaPredicted RBP17.78■□□□□ 0.44
SS18L1-202ENST00000370848 LENG1Q96BZ8 264 aaPredicted RBP17.78■□□□□ 0.44
SS18L1-202ENST00000370848 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
SS18L1-202ENST00000370848 CNNM2Q9H8M5 875 aa17.78■□□□□ 0.44
SS18L1-202ENST00000370848 RAVER2Q9HCJ3 691 aaKnown RBP17.78■□□□□ 0.44
SS18L1-202ENST00000370848 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.78■□□□□ 0.44
SS18L1-202ENST00000370848 CDK7P50613 346 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 SNAP25P60880 206 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 CREB3L3Q68CJ9 461 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 CHST3Q7LGC8 479 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 IQCA1Q86XH1 822 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 CPXCR1Q8N123 301 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 CHURC1Q8WUH1 139 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 NUP133Q8WUM0 1156 aa17.77■□□□□ 0.44
SS18L1-202ENST00000370848 TMEM265A0A087WTH1 108 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 CTAGE5O15320 804 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 PDHBP11177 359 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 ANTXR2P58335 489 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 FAAP100Q0VG06 881 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 NECTIN1Q15223 517 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 ARMCX2Q7L311 632 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 DGKHQ86XP1 1220 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 ANKRD35Q8N283 1001 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 DCAF4Q8WV16 495 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 TTC14Q96N46 770 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 ACAD9Q9H845 621 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 SENP2Q9HC62 589 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 GPCPD1Q9NPB8 672 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 A1CFQ9NQ94 594 aaKnown RBP17.76■□□□□ 0.43
SS18L1-202ENST00000370848 PRDM5Q9NQX1 630 aaPredicted RBP17.76■□□□□ 0.43
SS18L1-202ENST00000370848 TBX21Q9UL17 535 aa17.76■□□□□ 0.43
SS18L1-202ENST00000370848 MROH7Q68CQ1 1323 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 VCANP13611 3396 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 PRUNE2Q8WUY3 3088 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 SLC16A2P36021 539 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 TRDNQ13061 729 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 IKQ13123 557 aaPredicted RBP17.75■□□□□ 0.43
SS18L1-202ENST00000370848 SEC23AQ15436 765 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 KCNA10Q16322 511 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 RALYLQ86SE5 291 aaKnown RBP17.75■□□□□ 0.43
SS18L1-202ENST00000370848 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
SS18L1-202ENST00000370848 PCSK9Q8NBP7 692 aaKnown RBP17.75■□□□□ 0.43
SS18L1-202ENST00000370848 NCOA7Q8NI08 942 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 ANKS1AQ92625 1134 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 UBAC1Q9BSL1 405 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 STARD7Q9NQZ5 370 aa17.75■□□□□ 0.43
SS18L1-202ENST00000370848 ASTN1O14525 1302 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 SPTBN5Q9NRC6 3674 aaKnown RBP17.74■□□□□ 0.43
SS18L1-202ENST00000370848 MYADML2A6NDP7 307 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 GOLGA8HP0CJ92 632 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 NT5C2P49902 561 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 CCDC144BQ3MJ40 725 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 BTNL9Q6UXG8 535 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 CCDC144CPQ8IYA2 1237 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 PNMA1Q8ND90 353 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 MORC4Q8TE76 937 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 KAT14Q9H8E8 782 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
SS18L1-202ENST00000370848 ZHX1Q9UKY1 873 aaPredicted RBP17.74■□□□□ 0.43
SS18L1-202ENST00000370848 PRR12Q9ULL5 1215 aa17.74■□□□□ 0.43
SS18L1-202ENST00000370848 CTDP1Q9Y5B0 961 aaPredicted RBP17.74■□□□□ 0.43
SS18L1-202ENST00000370848 CHD9Q3L8U1 2897 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 LOC102724159A0A0B4J2E5 919 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 MYCNP04198 464 aaPredicted RBP17.73■□□□□ 0.43
SS18L1-202ENST00000370848 SNHG28P0DPA3 235 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 EPHB4P54760 987 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 PWP2Q15269 919 aaKnown RBP17.73■□□□□ 0.43
SS18L1-202ENST00000370848 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 ZNF697Q5TEC3 545 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 RASEFQ8IZ41 740 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 SLC43A3Q8NBI5 491 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 CPVLQ9H3G5 476 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms