RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZBTB5O15062 677 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 PGK2P07205 417 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 XRCC5P13010 732 aaKnown RBP17.21■□□□□ 0.35
COL9A1-204ENST00000370496 UBXN2AP68543 259 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 MUM1L1Q5H9M0 696 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 TRIB2Q92519 343 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 ARMC5Q96C12 935 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
COL9A1-204ENST00000370496 PIGSQ96S52 555 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 AMNQ9BXJ7 453 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
COL9A1-204ENST00000370496 BAZ2BQ9UIF8 2168 aaKnown RBP17.21■□□□□ 0.35
COL9A1-204ENST00000370496 NID2Q14112 1375 aa17.21■□□□□ 0.34
COL9A1-204ENST00000370496 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-204ENST00000370496 INHAP05111 366 aa17.2■□□□□ 0.34
COL9A1-204ENST00000370496 HOXC6P09630 235 aa17.2■□□□□ 0.34
COL9A1-204ENST00000370496 TOB2Q14106 344 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-204ENST00000370496 CCL14Q16627 93 aa17.2■□□□□ 0.34
COL9A1-204ENST00000370496 NSMFQ6X4W1 530 aa17.2■□□□□ 0.34
COL9A1-204ENST00000370496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL9A1-204ENST00000370496 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
COL9A1-204ENST00000370496 IL17RAQ96F46 866 aa17.2■□□□□ 0.34
COL9A1-204ENST00000370496 LCTP09848 1927 aa17.2■□□□□ 0.34
COL9A1-204ENST00000370496 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 NFIBO00712 420 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 CYTH3O43739 400 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 COBLO75128 1261 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 TRAF1Q13077 416 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
COL9A1-204ENST00000370496 NPLOC4Q8TAT6 608 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 MTMR8Q96EF0 704 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 ZNF333Q96JL9 665 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 A1CFQ9NQ94 594 aaKnown RBP17.19■□□□□ 0.34
COL9A1-204ENST00000370496 CNTNAP5Q8WYK1 1306 aa17.19■□□□□ 0.34
COL9A1-204ENST00000370496 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
COL9A1-204ENST00000370496 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
COL9A1-204ENST00000370496 CCDC85CA6NKD9 419 aa17.18■□□□□ 0.34
COL9A1-204ENST00000370496 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
COL9A1-204ENST00000370496 SMARCA1P28370 1054 aa17.18■□□□□ 0.34
COL9A1-204ENST00000370496 ANKRD1Q15327 319 aa17.18■□□□□ 0.34
COL9A1-204ENST00000370496 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
COL9A1-204ENST00000370496 MRPL11Q9Y3B7 192 aaKnown RBP17.18■□□□□ 0.34
COL9A1-204ENST00000370496 PPP1R11O60927 126 aaPredicted RBP17.17■□□□□ 0.34
COL9A1-204ENST00000370496 RBM25P49756 843 aaKnown RBP17.17■□□□□ 0.34
COL9A1-204ENST00000370496 NEK4P51957 841 aa17.17■□□□□ 0.34
COL9A1-204ENST00000370496 PPP2R5BQ15173 497 aa17.17■□□□□ 0.34
COL9A1-204ENST00000370496 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
COL9A1-204ENST00000370496 NOL8Q76FK4 1167 aaKnown RBP17.17■□□□□ 0.34
COL9A1-204ENST00000370496 MAML3Q96JK9 1138 aa17.17■□□□□ 0.34
COL9A1-204ENST00000370496 LARP6Q9BRS8 491 aaKnown RBP17.17■□□□□ 0.34
COL9A1-204ENST00000370496 FLRT1Q9NZU1 646 aa17.17■□□□□ 0.34
COL9A1-204ENST00000370496 PCDHA1Q9Y5I3 950 aa17.17■□□□□ 0.34
COL9A1-204ENST00000370496 LRRC37A2A6NM11 1700 aa17.17■□□□□ 0.34
COL9A1-204ENST00000370496 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
COL9A1-204ENST00000370496 CALML3P27482 149 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 PDIA3P30101 505 aaKnown RBP17.16■□□□□ 0.34
COL9A1-204ENST00000370496 CDC27P30260 824 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 AK2P54819 239 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 ZNF792Q3KQV3 632 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 OLFML2BQ68BL8 750 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 SLC30A10Q6XR72 485 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 CLEC4DQ8WXI8 215 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 CYP39A1Q9NYL5 469 aa17.16■□□□□ 0.34
COL9A1-204ENST00000370496 DIS3Q9Y2L1 958 aaKnown RBP17.16■□□□□ 0.34
COL9A1-204ENST00000370496 DNAJC25-GNG10A0A024R161 153 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 EVCP57679 992 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 CCT2P78371 535 aaKnown RBP17.15■□□□□ 0.34
COL9A1-204ENST00000370496 TRIM32Q13049 653 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 STK3Q13188 491 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 MCF2L2Q86YR7 1114 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 MCM3APO60318 1980 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 FRMPD3Q5JV73 1810 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 hCG_1642624A0A1W2PR95 340 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 CCL5P13501 91 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 CYP2C19P33261 490 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 CNTN2Q02246 1040 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 BAATQ14032 418 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-204ENST00000370496 MTFR1Q15390 333 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 HEATR3Q7Z4Q2 680 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-204ENST00000370496 TMEM106CQ9BVX2 250 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
COL9A1-204ENST00000370496 ALDH8A1Q9H2A2 487 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-204ENST00000370496 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
COL9A1-204ENST00000370496 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
COL9A1-204ENST00000370496 CPLX1O14810 134 aa17.14■□□□□ 0.33
COL9A1-204ENST00000370496 CAPN15O75808 1086 aa17.14■□□□□ 0.33
COL9A1-204ENST00000370496 ADD1P35611 737 aaKnown RBP17.14■□□□□ 0.33
COL9A1-204ENST00000370496 RPS6P62753 249 aaKnown RBP17.14■□□□□ 0.33
COL9A1-204ENST00000370496 CACNB2Q08289 660 aaPredicted RBP17.14■□□□□ 0.33
COL9A1-204ENST00000370496 FAM133AQ8N9E0 248 aa17.14■□□□□ 0.33
COL9A1-204ENST00000370496 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
COL9A1-204ENST00000370496 TINF2Q9BSI4 451 aa17.14■□□□□ 0.33
COL9A1-204ENST00000370496 RNF208Q9H0X6 261 aa17.14■□□□□ 0.33
COL9A1-204ENST00000370496 UNC93B1Q9H1C4 597 aa17.14■□□□□ 0.33
COL9A1-204ENST00000370496 SLKQ9H2G2 1235 aaPredicted RBP17.14■□□□□ 0.33
COL9A1-204ENST00000370496 ADD3Q9UEY8 706 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms