RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 CCDC62Q6P9F0 684 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 NUP58Q9BVL2 599 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 RXRBP28702 533 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 NDUFA8P51970 172 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 KCTD2Q14681 263 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 LZTS2Q9BRK4 669 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 H7C0C1 242 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 OR52Z1P0C646 297 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 STAT1P42224 750 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 ATP5OP48047 213 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 PTGDRQ13258 359 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 EDC4Q6P2E9 1401 aaKnown RBP13.76□□□□□ -0.21
TMEM56-201ENST00000370203 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 CD58P19256 250 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 SESN3P58005 492 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 KRT71Q3SY84 523 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 PPFIBP2Q8ND30 876 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 MTERF2Q49AM1 385 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 LRCH2Q5VUJ6 765 aa13.76□□□□□ -0.21
TMEM56-201ENST00000370203 FTOQ9C0B1 505 aaKnown RBP eCLIP13.76□□□□□ -0.21
TMEM56-201ENST00000370203 SCG2P13521 617 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 ATP5JP18859 108 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 ODR4Q5SWX8 454 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 PIGSQ96S52 555 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 NXF1Q9UBU9 619 aaKnown RBP13.75□□□□□ -0.21
TMEM56-201ENST00000370203 F5H423 210 aaPredicted RBP13.75□□□□□ -0.21
TMEM56-201ENST00000370203 ENC1O14682 589 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 MESDQ14696 234 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 GOLGA8IPA6NC78 632 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 GOLGA8JA6NMD2 632 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 TLR3O15455 904 aaKnown RBP13.75□□□□□ -0.21
TMEM56-201ENST00000370203 RASSF7Q02833 373 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 CFAP221Q4G0U5 840 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 DCAF15Q66K64 600 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
TMEM56-201ENST00000370203 UGGT2Q9NYU1 1516 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 SFI1A8K8P3 1242 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
TMEM56-201ENST00000370203 ZMYND10O75800 440 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 RPN1P04843 607 aaKnown RBP13.75□□□□□ -0.21
TMEM56-201ENST00000370203 SCRN1Q12765 414 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 RSPH3Q86UC2 560 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 ERVV-2B6SEH9 535 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 C21orf2O43822 256 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 SRGAP2CP0DJJ0 459 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 CLCN1P35523 988 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 SMAD1Q15797 465 aaKnown RBP13.75□□□□□ -0.21
TMEM56-201ENST00000370203 NUF2Q9BZD4 464 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 GLT8D2Q9H1C3 349 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 RABGAP1Q9Y3P9 1069 aa13.75□□□□□ -0.21
TMEM56-201ENST00000370203 USP17L3A6NCW0 530 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 USP17L4A6NCW7 530 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 MYL3P08590 195 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 USP17L1Q7RTZ2 530 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 FAM149B1Q96BN6 582 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 DSCC1Q9BVC3 393 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 CACYBPQ9HB71 228 aaKnown RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 ZMYM6O95789 1325 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 FAM196BA6NMK8 535 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 POC1B-GALNT4F8VUJ3 575 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 ECE1P42892 770 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 TRIP13Q15645 432 aaPredicted RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 RBBP5Q15291 538 aaKnown RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 MYSM1Q5VVJ2 828 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 RAPH1Q70E73 1250 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 AFAP1L2Q8N4X5 818 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 FANCLQ9NW38 375 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 KDM3AQ9Y4C1 1321 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 BAG2O95816 211 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 CTNNA1P35221 906 aaKnown RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 MYL7Q01449 175 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 HDAC11Q96DB2 347 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 HESX1Q9UBX0 185 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 TSR3Q9UJK0 312 aaKnown RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 SGK1O00141 431 aa13.74□□□□□ -0.21
TMEM56-201ENST00000370203 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 RSRC2Q7L4I2 434 aaKnown RBP13.74□□□□□ -0.21
TMEM56-201ENST00000370203 ERCC6LQ2NKX8 1250 aa13.73□□□□□ -0.21
TMEM56-201ENST00000370203 SYCE1Q8N0S2 351 aa13.73□□□□□ -0.21
TMEM56-201ENST00000370203 ARFGAP2Q8N6H7 521 aa13.73□□□□□ -0.21
TMEM56-201ENST00000370203 CCNYQ8ND76 341 aa13.73□□□□□ -0.21
TMEM56-201ENST00000370203 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
TMEM56-201ENST00000370203 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.73□□□□□ -0.21
TMEM56-201ENST00000370203 OAS2P29728 719 aaKnown RBP13.73□□□□□ -0.21
TMEM56-201ENST00000370203 GNL1P36915 607 aaPredicted RBP13.73□□□□□ -0.21
TMEM56-201ENST00000370203 ZNF589Q86UQ0 364 aaPredicted RBP13.73□□□□□ -0.21
TMEM56-201ENST00000370203 FAM49AQ9H0Q0 323 aaPredicted RBP13.73□□□□□ -0.21
TMEM56-201ENST00000370203 UBN1Q9NPG3 1134 aa13.73□□□□□ -0.21
TMEM56-201ENST00000370203 PRKAG2Q9UGJ0 569 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms