RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 CDKL2Q92772 493 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 KIF9Q9HAQ2 790 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 IVNS1ABPQ9Y6Y0 642 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 POGZQ7Z3K3 1410 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 GAS7O60861 476 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 TRIP13Q15645 432 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-203ENST00000370096 BRDTQ58F21 947 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-203ENST00000370096 GLG1Q92896 1179 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 DYDC2Q96IM9 177 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 IPO11Q9UI26 975 aaKnown RBP12.11□□□□□ -0.47
COL11A1-203ENST00000370096 NCOA1Q15788 1441 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 LMNB1P20700 586 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 YWHAEP62258 255 aaKnown RBP12.11□□□□□ -0.47
COL11A1-203ENST00000370096 C16orf87Q6PH81 154 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 SLC35F6Q8N357 371 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 CCDC127Q96BQ5 260 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 SCAF11Q99590 1463 aaKnown RBP12.11□□□□□ -0.47
COL11A1-203ENST00000370096 A6NJR5 290 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 H3BRJ5 948 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 TRIM59Q8IWR1 403 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 EYA3Q99504 573 aa12.11□□□□□ -0.47
COL11A1-203ENST00000370096 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL11A1-203ENST00000370096 LPXNO60711 386 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 VAMP4O75379 141 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 HDLBPQ00341 1268 aaKnown RBP12.1□□□□□ -0.47
COL11A1-203ENST00000370096 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
COL11A1-203ENST00000370096 GRAMD4Q6IC98 578 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 MAML1Q92585 1016 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 ALKBH8Q96BT7 664 aaKnown RBP12.1□□□□□ -0.47
COL11A1-203ENST00000370096 UBN1Q9NPG3 1134 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 MED4Q9NPJ6 270 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 PYCARDQ9ULZ3 195 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 RAP1GDS1P52306 607 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 DMTNQ08495 405 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 FAM47CQ5HY64 1035 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 MAGOHBQ96A72 148 aaKnown RBP12.1□□□□□ -0.47
COL11A1-203ENST00000370096 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 SLC7A5Q01650 507 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 ZNF277Q9NRM2 450 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-203ENST00000370096 C1orf112Q9NSG2 853 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 THRAP3Q9Y2W1 955 aaKnown RBP12.1□□□□□ -0.47
COL11A1-203ENST00000370096 TNNC2P02585 160 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 BLVRAP53004 296 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 NOP14P78316 857 aaKnown RBP12.1□□□□□ -0.47
COL11A1-203ENST00000370096 ME3Q16798 604 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 ARHGEF16Q5VV41 709 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 ANGPTL8Q6UXH0 198 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 APOL6Q9BWW8 343 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 ASXL1Q8IXJ9 1541 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 ACTN1P12814 892 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 CCDC51Q96ER9 411 aa12.1□□□□□ -0.47
COL11A1-203ENST00000370096 MAFGO15525 162 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 EVI5O60447 810 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 PMS1P54277 932 aaKnown RBP12.09□□□□□ -0.47
COL11A1-203ENST00000370096 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 TTC30BQ8N4P2 665 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 YY1AP1Q9H869 796 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
COL11A1-203ENST00000370096 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-203ENST00000370096 ZNF532Q9HCE3 1301 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 GUCY2CP25092 1073 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 PLTPP55058 493 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 RALGAPBQ86X10 1494 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 E7EWF7 191 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 GRAMD1BQ3KR37 738 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 APPBP2Q92624 585 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 PAGR1Q9BTK6 254 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 SYNDIG1LA6NDD5 238 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 ANKRD65E5RJM6 399 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 PFDN6O15212 129 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 PDHA1P08559 390 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 MSH2P43246 934 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 CENPKQ9BS16 269 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 NOC2LQ9Y3T9 749 aaKnown RBP12.09□□□□□ -0.47
COL11A1-203ENST00000370096 PCDHB4Q9Y5E5 795 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 CPP00450 1065 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 IGBP1P78318 339 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 FBXL13Q8NEE6 735 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 EXT2Q93063 718 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 TSC22D3Q99576 134 aa12.09□□□□□ -0.47
COL11A1-203ENST00000370096 ZBTB24O43167 697 aaPredicted RBP12.08□□□□□ -0.47
COL11A1-203ENST00000370096 CCDC124Q96CT7 223 aaKnown RBP12.08□□□□□ -0.47
COL11A1-203ENST00000370096 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 REXO1Q8N1G1 1221 aaKnown RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 DNAJC17Q9NVM6 304 aaKnown RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 GNPATO15228 680 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 RPN1P04843 607 aaKnown RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 TFAP4Q01664 338 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 DDB1Q16531 1140 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 XKR9Q5GH70 373 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 PALMDQ9NP74 551 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 MOCS3O95396 460 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms