RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PPP2R2DQ66LE6 453 aa18.4■□□□□ 0.54
SSR4-204ENST00000370087 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
SSR4-204ENST00000370087 RPAP2Q8IXW5 612 aaPredicted RBP18.4■□□□□ 0.54
SSR4-204ENST00000370087 AGBL1Q96MI9 1066 aa18.4■□□□□ 0.54
SSR4-204ENST00000370087 FEM1BQ9UK73 627 aa18.4■□□□□ 0.54
SSR4-204ENST00000370087 OAZ1P54368 228 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 RASGRP2Q7LDG7 609 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 OSBP2Q969R2 916 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 MKL1Q969V6 931 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 MTIF3Q9H2K0 278 aaKnown RBP18.39■□□□□ 0.53
SSR4-204ENST00000370087 ACAD9Q9H845 621 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 ZBTB40Q9NUA8 1239 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 MTMR4Q9NYA4 1195 aa18.39■□□□□ 0.53
SSR4-204ENST00000370087 EPOPA6NHQ4 379 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 DYNC1LI2O43237 492 aaPredicted RBP18.38■□□□□ 0.53
SSR4-204ENST00000370087 HMMRO75330 724 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 SNAP25P60880 206 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 TTLL4Q14679 1199 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 KRT40Q6A162 431 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 FBXO16Q8IX29 292 aaPredicted RBP18.38■□□□□ 0.53
SSR4-204ENST00000370087 GMCL1P1Q8NEA9 526 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 PURBQ96QR8 312 aaKnown RBP18.38■□□□□ 0.53
SSR4-204ENST00000370087 SLC4A7Q9Y6M7 1214 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 PLIN4Q96Q06 1357 aa18.38■□□□□ 0.53
SSR4-204ENST00000370087 PRRC2BQ5JSZ5 2229 aaKnown RBP18.38■□□□□ 0.53
SSR4-204ENST00000370087 M0R2C6 588 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 CABYRO75952 493 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 ARHGEF15O94989 841 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 BMP3P12645 472 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
SSR4-204ENST00000370087 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 TAPT1Q6NXT6 567 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 EEPD1Q7L9B9 569 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 FAM122AQ96E09 287 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 PCDHA11Q9Y5I1 949 aa18.37■□□□□ 0.53
SSR4-204ENST00000370087 ZBBXA8MT70 800 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 TTLL1O95922 423 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 GIMAP6Q6P9H5 292 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 PPP1R13LQ8WUF5 828 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 AP5M1Q9H0R1 490 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 CERS4Q9HA82 394 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 TRMT13Q9NUP7 481 aaKnown RBP18.36■□□□□ 0.53
SSR4-204ENST00000370087 MTCH2Q9Y6C9 303 aa18.36■□□□□ 0.53
SSR4-204ENST00000370087 GPAA1O43292 621 aa18.35■□□□□ 0.53
SSR4-204ENST00000370087 CA3P07451 260 aa18.35■□□□□ 0.53
SSR4-204ENST00000370087 CYP2C9P11712 490 aa18.35■□□□□ 0.53
SSR4-204ENST00000370087 ATP2A2P16615 1042 aaKnown RBP18.35■□□□□ 0.53
SSR4-204ENST00000370087 APPBP2Q92624 585 aa18.35■□□□□ 0.53
SSR4-204ENST00000370087 TRERF1Q96PN7 1200 aa18.35■□□□□ 0.53
SSR4-204ENST00000370087 ALDH8A1Q9H2A2 487 aaPredicted RBP18.35■□□□□ 0.53
SSR4-204ENST00000370087 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
SSR4-204ENST00000370087 SCN10AQ9Y5Y9 1956 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 ASB14A6NK59 587 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 RBAK-RBAKDNI3L0D1 243 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 ALAS1P13196 640 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 TDO2P48775 406 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 STAT2P52630 851 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 SPRED2Q7Z698 418 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 ZNF444Q8N0Y2 327 aaPredicted RBP18.34■□□□□ 0.53
SSR4-204ENST00000370087 KBTBD3Q8NAB2 608 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 EPHX3Q9H6B9 360 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 CYP39A1Q9NYL5 469 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 SYNPO2Q9UMS6 1093 aa18.34■□□□□ 0.53
SSR4-204ENST00000370087 ERC2O15083 957 aa18.33■□□□□ 0.52
SSR4-204ENST00000370087 SKIV2LQ15477 1246 aaKnown RBP18.33■□□□□ 0.52
SSR4-204ENST00000370087 DEFB128Q7Z7B8 93 aa18.33■□□□□ 0.52
SSR4-204ENST00000370087 RPUSD2Q8IZ73 545 aaKnown RBP18.33■□□□□ 0.52
SSR4-204ENST00000370087 TET1Q8NFU7 2136 aa18.33■□□□□ 0.52
SSR4-204ENST00000370087 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
SSR4-204ENST00000370087 TSPYL2Q9H2G4 693 aaPredicted RBP18.33■□□□□ 0.52
SSR4-204ENST00000370087 MCCP23508 829 aa18.32■□□□□ 0.52
SSR4-204ENST00000370087 HOXD11P31277 338 aaPredicted RBP18.32■□□□□ 0.52
SSR4-204ENST00000370087 IQSEC1Q6DN90 963 aa18.32■□□□□ 0.52
SSR4-204ENST00000370087 KCTD1Q719H9 257 aa18.32■□□□□ 0.52
SSR4-204ENST00000370087 STAG1Q8WVM7 1258 aa18.32■□□□□ 0.52
SSR4-204ENST00000370087 KHSRPQ92945 711 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSR4-204ENST00000370087 GMCL1Q96IK5 515 aa18.32■□□□□ 0.52
SSR4-204ENST00000370087 LRRCC1Q9C099 1032 aa18.32■□□□□ 0.52
SSR4-204ENST00000370087 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
SSR4-204ENST00000370087 TNKSO95271 1327 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
SSR4-204ENST00000370087 ZEB2O60315 1214 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 TSPY3P0CV98 308 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 TSPY8P0CW00 308 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 POU3F3P20264 500 aaPredicted RBP18.31■□□□□ 0.52
SSR4-204ENST00000370087 TFAP4Q01664 338 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
SSR4-204ENST00000370087 TKFCQ3LXA3 575 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 TMEM67Q5HYA8 995 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 IFNL3Q8IZI9 196 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 MORC4Q8TE76 937 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms