RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 LIMA1Q9UHB6 759 aaKnown RBP12.92□□□□□ -0.34
RAB39B-201ENST00000369454 TTF2Q9UNY4 1162 aaKnown RBP12.92□□□□□ -0.34
RAB39B-201ENST00000369454 CCDC88AQ3V6T2 1871 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 EFCAB8A8MWE9 144 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 ENC1O14682 589 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 MARCH6O60337 910 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 TUBB4AP04350 444 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 SSBP05455 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAB39B-201ENST00000369454 DDR1Q08345 913 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 CCDC96Q2M329 555 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 KCTD1Q719H9 257 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 ZMYND12Q9H0C1 365 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 DDX4Q9NQI0 724 aaKnown RBP12.92□□□□□ -0.34
RAB39B-201ENST00000369454 ARGLU1Q9NWB6 273 aaPredicted RBP12.92□□□□□ -0.34
RAB39B-201ENST00000369454 BTAF1O14981 1849 aa12.92□□□□□ -0.34
RAB39B-201ENST00000369454 KLRC4O43908 158 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 GNA11P29992 359 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 SHROOM1Q2M3G4 852 aaPredicted RBP12.91□□□□□ -0.34
RAB39B-201ENST00000369454 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
RAB39B-201ENST00000369454 MYH8P13535 1937 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 RHOXF2BP0C7M4 288 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 TRIM21P19474 475 aaKnown RBP12.91□□□□□ -0.34
RAB39B-201ENST00000369454 MTIF2P46199 727 aaKnown RBP12.91□□□□□ -0.34
RAB39B-201ENST00000369454 SPAG1Q07617 926 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 ANKS1AQ92625 1134 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 PKNOX2Q96KN3 472 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 RHOXF2Q9BQY4 288 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 AGPAT5Q9NUQ2 364 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 ERICH4A6NGS2 130 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 SLC37A4O43826 429 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 PNMA6AP0CW24 399 aaPredicted RBP12.91□□□□□ -0.34
RAB39B-201ENST00000369454 PDHBP11177 359 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 RAD51AP2Q09MP3 1159 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 MCM6Q14566 821 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 KRT25Q7Z3Z0 450 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 CDK5RAP3Q96JB5 506 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 PRDM4Q9UKN5 801 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 PCDHAC2Q9Y5I4 1007 aa12.91□□□□□ -0.34
RAB39B-201ENST00000369454 KIAA1551Q9HCM1 1747 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 H7C1D1 291 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 PARD6BQ9BYG5 372 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 TRIM9Q9C026 710 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 KCNQ5Q9NR82 932 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
RAB39B-201ENST00000369454 FHOD1Q9Y613 1164 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 BMS1Q14692 1282 aaKnown RBP12.9□□□□□ -0.34
RAB39B-201ENST00000369454 LRRC41Q15345 812 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 CYP26C1Q6V0L0 522 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 MB21D1Q8N884 522 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 ZC3H12CQ9C0D7 883 aaKnown RBP12.9□□□□□ -0.34
RAB39B-201ENST00000369454 USP40Q9NVE5 1235 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.34
RAB39B-201ENST00000369454 RBM5P52756 815 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAB39B-201ENST00000369454 TBC1D8BQ0IIM8 1120 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CALCRLQ16602 461 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
RAB39B-201ENST00000369454 NUDT12Q9BQG2 462 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 SPZ1Q9BXG8 430 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 AFF2P51816 1311 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 IL1R1P14778 569 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 PLCG2P16885 1265 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CHMP4BP1P59074 171 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 SNAP25P60880 206 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
RAB39B-201ENST00000369454 TMTC1Q8IUR5 882 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CERS5Q8N5B7 392 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 NAA15Q9BXJ9 866 aaKnown RBP12.89□□□□□ -0.35
RAB39B-201ENST00000369454 ZCCHC17Q9NP64 241 aaKnown RBP12.89□□□□□ -0.35
RAB39B-201ENST00000369454 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CTAGE9A4FU28 777 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CNOT6LQ96LI5 555 aaKnown RBP12.89□□□□□ -0.35
RAB39B-201ENST00000369454 HINFPQ9BQA5 517 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 CCSER1Q9C0I3 900 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 MTMR4Q9NYA4 1195 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 HDAC6Q9UBN7 1215 aa12.89□□□□□ -0.35
RAB39B-201ENST00000369454 LRRC10BA6NIK2 292 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 NFIAQ12857 509 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 NCAPH2Q6IBW4 605 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 ZSCAN29Q8IWY8 852 aaPredicted RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 GLIS3Q8NEA6 775 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 GOLGA1Q92805 767 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 EPN1Q9Y6I3 576 aaPredicted RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 PPEF1O14829 653 aaPredicted RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 ZFPM1Q8IX07 1006 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms