RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 RTN1Q16799 776 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 FBXO11Q86XK2 927 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 CCDC144CPQ8IYA2 1237 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 ARMC5Q96C12 935 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 HTTP42858 3142 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 BAZ2BQ9UIF8 2168 aaKnown RBP21.67■■□□□ 1.06
LMNA-204ENST00000368298 CCDC196A0A1B0GTZ2 297 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 GOLGA8AA7E2F4 631 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 GOLGA8BA8MQT2 603 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 CYP2B6P20813 491 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 METAP2P50579 478 aaKnown RBP eCLIP21.66■■□□□ 1.06
LMNA-204ENST00000368298 FUT2Q10981 343 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 TRAF1Q13077 416 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 ANKRD1Q15327 319 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 MUM1L1Q5H9M0 696 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 IL27Q8NEV9 243 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 CLEC4DQ8WXI8 215 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 PIGSQ96S52 555 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 AMNQ9BXJ7 453 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 HOMER2Q9NSB8 354 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 SLC5A4Q9NY91 659 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 ABCB11O95342 1321 aa21.66■■□□□ 1.06
LMNA-204ENST00000368298 PPP1R11O60927 126 aaPredicted RBP21.65■■□□□ 1.06
LMNA-204ENST00000368298 CDC27P30260 824 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 NEK4P51957 841 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 ZNF792Q3KQV3 632 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 SLC9C1Q4G0N8 1177 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 DPP9Q86TI2 863 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 NPLOC4Q8TAT6 608 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 TBC1D32Q96NH3 1257 aa21.65■■□□□ 1.06
LMNA-204ENST00000368298 A1CFQ9NQ94 594 aaKnown RBP21.65■■□□□ 1.06
LMNA-204ENST00000368298 CCDC85CA6NKD9 419 aa21.64■■□□□ 1.06
LMNA-204ENST00000368298 RRP36Q96EU6 259 aaKnown RBP21.64■■□□□ 1.06
LMNA-204ENST00000368298 PFASO15067 1338 aa21.64■■□□□ 1.06
LMNA-204ENST00000368298 AK2P54819 239 aa21.64■■□□□ 1.05
LMNA-204ENST00000368298 OLFML2BQ68BL8 750 aa21.64■■□□□ 1.05
LMNA-204ENST00000368298 CMTR1Q8N1G2 835 aaKnown RBP21.64■■□□□ 1.05
LMNA-204ENST00000368298 ANKRD35Q8N283 1001 aa21.64■■□□□ 1.05
LMNA-204ENST00000368298 TRIB2Q92519 343 aa21.64■■□□□ 1.05
LMNA-204ENST00000368298 DDX11Q96FC9 970 aa21.64■■□□□ 1.05
LMNA-204ENST00000368298 PLXNA1Q9UIW2 1896 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 NFIBO00712 420 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 HMGCRP04035 888 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 PGK2P07205 417 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 ELNP15502 786 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 TAL1P17542 331 aaPredicted RBP21.63■■□□□ 1.05
LMNA-204ENST00000368298 ADD1P35611 737 aaKnown RBP21.63■■□□□ 1.05
LMNA-204ENST00000368298 USH1GQ495M9 461 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 HOMER1Q86YM7 354 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 ZNF333Q96JL9 665 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 CYP39A1Q9NYL5 469 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 NAP1L2Q9ULW6 460 aaPredicted RBP21.63■■□□□ 1.05
LMNA-204ENST00000368298 MRPL11Q9Y3B7 192 aaKnown RBP21.63■■□□□ 1.05
LMNA-204ENST00000368298 PCDHA1Q9Y5I3 950 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 CNTNAP5Q8WYK1 1306 aa21.63■■□□□ 1.05
LMNA-204ENST00000368298 GHRHRQ02643 423 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 NTRK3Q16288 839 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 CCL14Q16627 93 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 ZNF467Q7Z7K2 595 aaPredicted RBP21.62■■□□□ 1.05
LMNA-204ENST00000368298 SAMD3Q8N6K7 520 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 FAM133AQ8N9E0 248 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 SH3TC2Q8TF17 1288 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 MAML3Q96JK9 1138 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 FLRT1Q9NZU1 646 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 TPCN1Q9ULQ1 816 aa21.62■■□□□ 1.05
LMNA-204ENST00000368298 MCF2L2Q86YR7 1114 aa21.61■■□□□ 1.05
LMNA-204ENST00000368298 CCDC82Q8N4S0 544 aa21.61■■□□□ 1.05
LMNA-204ENST00000368298 MSL3Q8N5Y2 521 aaKnown RBP21.61■■□□□ 1.05
LMNA-204ENST00000368298 LARP6Q9BRS8 491 aaKnown RBP21.61■■□□□ 1.05
LMNA-204ENST00000368298 SEC63Q9UGP8 760 aaKnown RBP21.61■■□□□ 1.05
LMNA-204ENST00000368298 OPLAHO14841 1288 aa21.6■■□□□ 1.05
LMNA-204ENST00000368298 MAP3K21Q5TCX8 1036 aa21.6■■□□□ 1.05
LMNA-204ENST00000368298 MAP3K20Q9NYL2 800 aaKnown RBP21.6■■□□□ 1.05
LMNA-204ENST00000368298 INHAP05111 366 aa21.59■■□□□ 1.05
LMNA-204ENST00000368298 IFNAR1P17181 557 aa21.59■■□□□ 1.05
LMNA-204ENST00000368298 BAATQ14032 418 aaPredicted RBP21.59■■□□□ 1.05
LMNA-204ENST00000368298 RABEP1Q15276 862 aa21.59■■□□□ 1.05
LMNA-204ENST00000368298 MAMDC4Q6UXC1 1216 aa21.59■■□□□ 1.05
LMNA-204ENST00000368298 NSMFQ6X4W1 530 aa21.59■■□□□ 1.05
LMNA-204ENST00000368298 FGD4Q96M96 766 aa21.59■■□□□ 1.05
LMNA-204ENST00000368298 LCTP09848 1927 aa21.58■■□□□ 1.05
LMNA-204ENST00000368298 POTEB2H3BUK9 544 aa21.58■■□□□ 1.05
LMNA-204ENST00000368298 PFKFB2O60825 505 aa21.58■■□□□ 1.05
LMNA-204ENST00000368298 UBXN2AP68543 259 aa21.58■■□□□ 1.05
LMNA-204ENST00000368298 CCT2P78371 535 aaKnown RBP21.58■■□□□ 1.05
LMNA-204ENST00000368298 RNF207Q6ZRF8 634 aa21.58■■□□□ 1.05
LMNA-204ENST00000368298 NCOA5Q9HCD5 579 aaKnown RBP21.58■■□□□ 1.05
LMNA-204ENST00000368298 RBM27Q9P2N5 1060 aaKnown RBP21.58■■□□□ 1.05
LMNA-204ENST00000368298 V9GY48 417 aaPredicted RBP21.58■■□□□ 1.05
LMNA-204ENST00000368298 RBBP6Q7Z6E9 1792 aaKnown RBP21.58■■□□□ 1.05
LMNA-204ENST00000368298 LOC102724159A0A0B4J2E5 919 aa21.58■■□□□ 1.04
LMNA-204ENST00000368298 HSD17B4P51659 736 aa21.58■■□□□ 1.04
LMNA-204ENST00000368298 RPS6P62753 249 aaKnown RBP21.58■■□□□ 1.04
LMNA-204ENST00000368298 CNTN2Q02246 1040 aa21.58■■□□□ 1.04
LMNA-204ENST00000368298 PWP2Q15269 919 aaKnown RBP21.58■■□□□ 1.04
LMNA-204ENST00000368298 MFSD14CQ5VZR4 134 aa21.58■■□□□ 1.04
LMNA-204ENST00000368298 PIBF1Q8WXW3 757 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms