RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 BLZF1Q9H2G9 400 aa16.53■□□□□ 0.24
PRKN-204ENST00000366896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.53■□□□□ 0.244e-10■■■■□ 21.6
PRKN-204ENST00000366896 PTGDRQ13258 359 aa16.53■□□□□ 0.24
PRKN-204ENST00000366896 SEMA3FQ13275 785 aa16.53■□□□□ 0.24
PRKN-204ENST00000366896 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
PRKN-204ENST00000366896 PPIP5K2O43314 1243 aa16.52■□□□□ 0.24
PRKN-204ENST00000366896 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
PRKN-204ENST00000366896 TRIM14Q14142 442 aa16.52■□□□□ 0.24
PRKN-204ENST00000366896 GOLGA6L1Q8N7Z2 621 aa16.52■□□□□ 0.24
PRKN-204ENST00000366896 DBNDD1Q9H9R9 158 aa16.52■□□□□ 0.24
PRKN-204ENST00000366896 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.24
PRKN-204ENST00000366896 ZNF277Q9NRM2 450 aaPredicted RBP16.52■□□□□ 0.24
PRKN-204ENST00000366896 TTF2Q9UNY4 1162 aaKnown RBP16.52■□□□□ 0.24
PRKN-204ENST00000366896 USP17L12C9JPN9 530 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 USP17L21D6R901 530 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 NFKBIEO00221 500 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 ARL6IP4Q66PJ3 421 aaKnown RBP16.52■□□□□ 0.23
PRKN-204ENST00000366896 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 FAM71BQ8TC56 605 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 MYO1AQ9UBC5 1043 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 MKRN1Q9UHC7 482 aaKnown RBP16.52■□□□□ 0.23
PRKN-204ENST00000366896 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 FAM205AQ6ZU69 1335 aa16.52■□□□□ 0.23
PRKN-204ENST00000366896 G3V3G9 751 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
PRKN-204ENST00000366896 CASP14P31944 242 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
PRKN-204ENST00000366896 MAGEA9P43362 315 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 CASP8Q14790 479 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 IL17AQ16552 155 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 FAM47AQ5JRC9 791 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 ZNF569Q5MCW4 686 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 DCAF8Q5TAQ9 597 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 PODNQ7Z5L7 613 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 TMTC1Q8IUR5 882 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 MTRQ99707 1265 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 TAOK3Q9H2K8 898 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 COL4A5P29400 1685 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 ECE2O60344 883 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 GYPCP04921 128 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 FXR1P51114 621 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKN-204ENST00000366896 VSNL1P62760 191 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 KIF4BQ2VIQ3 1234 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 FOXR1Q6PIV2 292 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 RMND1Q9NWS8 449 aa16.51■□□□□ 0.23
PRKN-204ENST00000366896 CTAGE9A4FU28 777 aa16.5■□□□□ 0.23
PRKN-204ENST00000366896 TUBBP07437 444 aa16.5■□□□□ 0.23
PRKN-204ENST00000366896 PDXDC2PQ6P474 469 aa16.5■□□□□ 0.23
PRKN-204ENST00000366896 CYP2D6P10635 497 aa16.5■□□□□ 0.23
PRKN-204ENST00000366896 GTF2IP78347 998 aa16.5■□□□□ 0.23
PRKN-204ENST00000366896 WWC2Q6AWC2 1192 aa16.5■□□□□ 0.23
PRKN-204ENST00000366896 CTCFLQ8NI51 663 aaPredicted RBP16.5■□□□□ 0.23
PRKN-204ENST00000366896 ZFP91Q96JP5 570 aaPredicted RBP16.5■□□□□ 0.23
PRKN-204ENST00000366896 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
PRKN-204ENST00000366896 LTBP3Q9NS15 1303 aa16.5■□□□□ 0.23
PRKN-204ENST00000366896 ZNF646O15015 1829 aaPredicted RBP16.5■□□□□ 0.23
PRKN-204ENST00000366896 MAST2Q6P0Q8 1798 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 RHOXF2BP0C7M4 288 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 SCG2P13521 617 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 MCM7P33993 719 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 KRT31Q15323 416 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
PRKN-204ENST00000366896 WHAMMP3Q1A5X7 153 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 RHOXF2Q9BQY4 288 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 MED4Q9NPJ6 270 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 MYH8P13535 1937 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 PRDX5P30044 214 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 CDC25AP30304 524 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 LONP1P36776 959 aaKnown RBP16.49■□□□□ 0.23
PRKN-204ENST00000366896 HSP90B2PQ58FF3 399 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 SLC35F6Q8N357 371 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 SH3GLB2Q9NR46 395 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 KCNQ5Q9NR82 932 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 ATP8A2Q9NTI2 1148 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
PRKN-204ENST00000366896 CTAGE15A4D2H0 777 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 EIF3CLB5ME19 914 aaKnown RBP16.48■□□□□ 0.23
PRKN-204ENST00000366896 RNF225M0QZC1 329 aaPredicted RBP16.48■□□□□ 0.23
PRKN-204ENST00000366896 ABL1P00519 1130 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 CTAGE8P0CG41 777 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 CALML3P27482 149 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 NLRP5P59047 1200 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 SLC4A8Q2Y0W8 1093 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 ZNF658Q5TYW1 1059 aaPredicted RBP16.48■□□□□ 0.23
PRKN-204ENST00000366896 RRAGBQ5VZM2 374 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 ICE2Q659A1 982 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 LRRC31Q6UY01 552 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 CTAGE6Q86UF2 777 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 CTAGE4Q8IX94 777 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 ACRBPQ8NEB7 543 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 EIF3CQ99613 913 aaKnown RBP16.48■□□□□ 0.23
PRKN-204ENST00000366896 MECOMQ03112 1051 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 PAK1Q13153 545 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms