RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 CCNE1P24864 410 aa5.93□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCDC17Q96LX7 622 aa5.93□□□□□ -1.46
CDC42BPA-204ENST00000366767 TSPYL2Q9H2G4 693 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-204ENST00000366767 BLZF1Q9H2G9 400 aa5.93□□□□□ -1.46
CDC42BPA-204ENST00000366767 FMN2Q9NZ56 1722 aa5.93□□□□□ -1.46
CDC42BPA-204ENST00000366767 PXDNQ92626 1479 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 EPB41P11171 864 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 PRPF4BQ13523 1007 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SCARF1Q14162 830 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCDC26Q8TAB7 109 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 P2RX5Q93086 422 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 VTI1AQ96AJ9 217 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SEC31BQ9NQW1 1179 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 A0A1W2PQC6 194 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 TNNI2P48788 182 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 ASIC2Q16515 512 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 KIAA0753Q2KHM9 967 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 PI16Q6UXB8 463 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 BAIAP2L1Q9UHR4 511 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 HYOU1Q9Y4L1 999 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 MST1RQ04912 1400 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 PRKAB2O43741 272 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 ANTXR2P58335 489 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 ATP2C1P98194 919 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 ZBTB16Q05516 673 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 GPATCH4Q5T3I0 446 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCDC174Q6PII3 467 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 MYOCDQ8IZQ8 938 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 CMTR1Q8N1G2 835 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 RAB3IL1Q8TBN0 382 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SLF1Q9BQI6 1058 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 RABEP2Q9H5N1 569 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 FER1L4A9Z1Z3 1794 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 LMTK3Q96Q04 1460 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 TRAF5O00463 557 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 CFAP221Q4G0U5 840 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SPATS2Q86XZ4 545 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 FAM71BQ8TC56 605 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 AIFM3Q96NN9 605 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SAMSN1Q9NSI8 373 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 HDAC9Q9UKV0 1011 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 HPSEQ9Y251 543 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 JRKLQ9Y4A0 524 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 MEGF6O75095 1541 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 KIF1CO43896 1103 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 FERP16591 822 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 UFL1O94874 794 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 ALDH1B1P30837 517 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 NR5A1Q13285 461 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 NEDD9Q14511 834 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 TCP11X2Q5H9J9 407 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 TEX2Q8IWB9 1127 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 EFCAB13Q8IY85 973 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 PPP1R14CQ8TAE6 165 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 UBA5Q9GZZ9 404 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SH2D4AQ9H788 454 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 METTL14Q9HCE5 456 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SOS2Q07890 1332 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SALL1Q9NSC2 1324 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 MFAP3LO75121 409 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 CASP14P31944 242 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 ZBED6P86452 979 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 PICALMQ13492 652 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 KCNB1Q14721 858 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 SYCE1Q8N0S2 351 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 MB21D1Q8N884 522 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 TSC1Q92574 1164 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 PHF20Q9BVI0 1012 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 HPS5Q9UPZ3 1129 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 TAF6LQ9Y6J9 622 aa5.92□□□□□ -1.46
CDC42BPA-204ENST00000366767 LRRD1A4D1F6 860 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 KIF28PB7ZC32 967 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 SLC26A4O43511 780 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 BBOX1O75936 387 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 VIMP08670 466 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 LIG3P49916 1009 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PPP2R5EQ16537 467 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 APBB1IPQ7Z5R6 666 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 TGFBRAP1Q8WUH2 860 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 TUBGCP2Q9BSJ2 902 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PEAK1Q9H792 1746 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 RPS6KA4O75676 772 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 DYNLL1P63167 89 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PPFIA1Q13136 1202 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 NYAP1Q6ZVC0 841 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PNMA8AQ86V59 439 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 DISC1Q9NRI5 854 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 MINPP1Q9UNW1 487 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 DNM3Q9UQ16 869 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 TOPAZ1Q8N9V7 1692 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 MAN2A1Q16706 1144 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 SYCP3Q8IZU3 236 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 WHAMMQ8TF30 809 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 IFT81Q8WYA0 676 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 LIMA1Q9UHB6 759 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 SAP30BPQ9UHR5 308 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PIK3C2AO00443 1686 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 FAM237AA0A1B0GTK4 181 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms