RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 TMEM232C9JQI7 657 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 ZEB2O60315 1214 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 CHRM1P11229 460 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-209ENST00000366735 ITGB8P26012 769 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 TFAP4Q01664 338 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 GNASQ5JWF2 1037 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 CCSAPQ6IQ19 270 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-209ENST00000366735 PSRC1Q6PGN9 363 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-209ENST00000366735 CCDC129Q6ZRS4 1044 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 KCNV2Q8TDN2 545 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-209ENST00000366735 SEZ6LQ9BYH1 1024 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 RNF146Q9NTX7 359 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 TBX21Q9UL17 535 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 LAMA4Q16363 1823 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 ARVCFO00192 962 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 PLA2G6O60733 806 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 CABYRO75952 493 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 DNAJB2P25686 324 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 MFSD5Q6N075 450 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 NOL8Q76FK4 1167 aaKnown RBP14.67□□□□□ -0.06
MRPL55-209ENST00000366735 CCDC144CPQ8IYA2 1237 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 STAG1Q8WVM7 1258 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 SYMPKQ92797 1274 aaKnown RBP14.67□□□□□ -0.06
MRPL55-209ENST00000366735 TTYH1Q9H313 450 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-209ENST00000366735 STX8Q9UNK0 236 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 PCDHB15Q9Y5E8 787 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 EYSQ5T1H1 3165 aa14.67□□□□□ -0.06
MRPL55-209ENST00000366735 MYADML2A6NDP7 307 aa14.66□□□□□ -0.06
MRPL55-209ENST00000366735 MX1P20591 662 aa14.66□□□□□ -0.06
MRPL55-209ENST00000366735 TNFAIP2Q03169 654 aa14.66□□□□□ -0.06
MRPL55-209ENST00000366735 TLK2Q86UE8 772 aa14.66□□□□□ -0.06
MRPL55-209ENST00000366735 AP5M1Q9H0R1 490 aa14.66□□□□□ -0.06
MRPL55-209ENST00000366735 A1CFQ9NQ94 594 aaKnown RBP14.66□□□□□ -0.06
MRPL55-209ENST00000366735 TANC1Q9C0D5 1861 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 ALAS1P13196 640 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 CDK7P50613 346 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 EPHB4P54760 987 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 HDAC1Q13547 482 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-209ENST00000366735 ZMYM1Q5SVZ6 1142 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 FAM126BQ8IXS8 530 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 FAM133AQ8N9E0 248 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 PI4K2BQ8TCG2 481 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 TIFAQ96CG3 184 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 TRERF1Q96PN7 1200 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 GAS2L1Q99501 681 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-209ENST00000366735 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■■■□ 24.9
MRPL55-209ENST00000366735 MYO9BQ13459 2157 aa14.65□□□□□ -0.06
MRPL55-209ENST00000366735 NKX3-2P78367 333 aa14.64□□□□□ -0.07
MRPL55-209ENST00000366735 CCDC96Q2M329 555 aa14.64□□□□□ -0.07
MRPL55-209ENST00000366735 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
MRPL55-209ENST00000366735 FGD4Q96M96 766 aa14.64□□□□□ -0.07
MRPL55-209ENST00000366735 MPHOSPH6Q99547 160 aaKnown RBP14.64□□□□□ -0.07
MRPL55-209ENST00000366735 RWDD1Q9H446 243 aaPredicted RBP14.64□□□□□ -0.07
MRPL55-209ENST00000366735 ADD3Q9UEY8 706 aaKnown RBP14.64□□□□□ -0.07
MRPL55-209ENST00000366735 PNMA2Q9UL42 364 aa14.64□□□□□ -0.07
MRPL55-209ENST00000366735 CCPG1Q9ULG6 757 aa14.64□□□□□ -0.07
MRPL55-209ENST00000366735 LOC102724159A0A0B4J2E5 919 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 ADCY6O43306 1168 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 RANBP6O60518 1105 aaKnown RBP14.63□□□□□ -0.07
MRPL55-209ENST00000366735 IGHDP01880 384 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 MCCP23508 829 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 CNTN2Q02246 1040 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 PWP2Q15269 919 aaKnown RBP14.63□□□□□ -0.07
MRPL55-209ENST00000366735 RAB30Q15771 203 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 FSCN1Q16658 493 aaKnown RBP14.63□□□□□ -0.07
MRPL55-209ENST00000366735 RCSD1Q6JBY9 416 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 DCAF4Q8WV16 495 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 AGBL1Q96MI9 1066 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 SEC62Q99442 399 aaKnown RBP14.63□□□□□ -0.07
MRPL55-209ENST00000366735 PPP1R12CQ9BZL4 782 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 KATNBL1Q9H079 304 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 ZNF576Q9H609 170 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 VTA1Q9NP79 307 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 WDR70Q9NW82 654 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 Q9Y3F1 56 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 ZNF536O15090 1300 aa14.63□□□□□ -0.07
MRPL55-209ENST00000366735 KIAA1217Q5T5P2 1943 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 CSF2RAP15509 400 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 TMEM240Q5SV17 173 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 IQSEC1Q6DN90 963 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 NSMFQ6X4W1 530 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 KCTD1Q719H9 257 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 EVI5LQ96CN4 794 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 HIPK3Q9H422 1215 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 TOMM22Q9NS69 142 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 CYP39A1Q9NYL5 469 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 MSRAQ9UJ68 235 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 ANAPC4Q9UJX5 808 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 PRR12Q9ULL5 1215 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
MRPL55-209ENST00000366735 RAD50Q92878 1312 aa14.62□□□□□ -0.07
MRPL55-209ENST00000366735 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-209ENST00000366735 SOWAHBA6NEL2 793 aa14.61□□□□□ -0.07
MRPL55-209ENST00000366735 CD4P01730 458 aa14.61□□□□□ -0.07
MRPL55-209ENST00000366735 ICAM1P05362 532 aa14.61□□□□□ -0.07
MRPL55-209ENST00000366735 BEX3Q00994 111 aa14.61□□□□□ -0.07
MRPL55-209ENST00000366735 CTDSPL2Q05D32 466 aa14.61□□□□□ -0.07
MRPL55-209ENST00000366735 ITGA7Q13683 1181 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms