RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SLC12A9Q9BXP2 914 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 NPFFR2Q9Y5X5 522 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 BACE2Q9Y5Z0 518 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 U3KQE9 123 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 ASXL2Q76L83 1435 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 C2orf71A6NGG8 1288 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 STXBP3O00186 592 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 ZNF205O95201 554 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 ASLP04424 464 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 THBDP07204 575 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 CD3EP07766 207 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 CNGA1P29973 690 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 CLCN7P51798 805 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 GAB4Q2WGN9 574 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 RSPO2Q6UXX9 243 aaPredicted RBP5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 FGD2Q7Z6J4 655 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 SPACA3Q8IXA5 215 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 PPM1KQ8N3J5 372 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 USHBP1Q8N6Y0 703 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 ZFYVE21Q9BQ24 234 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 TPSG1Q9NRR2 321 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 TYW1Q9NV66 732 aaKnown RBP5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 DDX56Q9NY93 547 aaKnown RBP5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 ATP8A1Q9Y2Q0 1164 aa5.26□□□□□ -1.57
RNU6-28P-201ENST00000362378 TCRBV16S1A1N1A0A5B0 115 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 ARNTLO00327 626 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 AQP7O14520 342 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 GSC2O15499 205 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 NPTXRO95502 500 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 IGLV1-40P01703 118 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 CEACAM5P06731 702 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 H2AFB1P0C5Y9 115 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 H2AFB2P0C5Z0 115 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 IFNGR1P15260 489 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 IGFALSP35858 605 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 RTP2Q5QGT7 225 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 EEF1DP3Q658K8 133 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 E4F1Q66K89 784 aaPredicted RBP5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 CNNM4Q6P4Q7 775 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 USP53Q70EK8 1073 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 SLC51AQ86UW1 340 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 JAMLQ86YT9 394 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 AHI1Q8N157 1196 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 AFAP1L2Q8N4X5 818 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 SHKBP1Q8TBC3 707 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 STAG1Q8WVM7 1258 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 MAGEB10Q96LZ2 347 aaPredicted RBP5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 OSBPL1AQ9BXW6 950 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 FAM126AQ9BYI3 521 aaPredicted RBP5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 METTL14Q9HCE5 456 aaKnown RBP5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 SEMA3GQ9NS98 782 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 ATG3Q9NT62 314 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 PLAGL2Q9UPG8 496 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 TNPO3Q9Y5L0 923 aaKnown RBP5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 SNX11Q9Y5W9 270 aa5.25□□□□□ -1.57
RNU6-28P-201ENST00000362378 WDR64B1ANS9 1081 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 MEFVO15553 781 aaPredicted RBP5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 ITGB2P05107 769 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 NAT1P18440 290 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 TPP2P29144 1249 aaPredicted RBP5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 SEPHS1P49903 392 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 PCBP3P57721 371 aaKnown RBP5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 NFKB2Q00653 900 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 CDKAL1Q5VV42 579 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 IQCEQ6IPM2 695 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 KCNT2Q6UVM3 1135 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 RNF111Q6ZNA4 994 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 ARHGAP27Q6ZUM4 889 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 PPIL6Q8IXY8 311 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 FAM181AQ8N9Y4 354 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 PRPF38AQ8NAV1 312 aaKnown RBP5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 HSPA12BQ96MM6 686 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 MTFR1LQ9H019 292 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 GPRC5CQ9NQ84 441 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 GPR27Q9NS67 375 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 TRAF6Q9Y4K3 522 aa5.24□□□□□ -1.57
RNU6-28P-201ENST00000362378 WASH4PA8MWX3 477 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 B4E1Z4 1266 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 OPA1O60313 960 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 CRTAMO95727 393 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 SYPP08247 313 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 PDGFRBP09619 1106 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 PLS3P13797 630 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 FSTP19883 344 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 ENDOUP21128 410 aaKnown RBP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 LTBRP36941 435 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 CDKN1CP49918 316 aaPredicted RBP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 GPR85P60893 370 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 KCNAB2Q13303 367 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 ZNF460Q14592 562 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 IFI16Q16666 785 aaKnown RBP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 PLEKHG6Q3KR16 790 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 CT47A1Q5JQC4 288 aaPredicted RBP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 DDX46Q7L014 1031 aaKnown RBP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 TMPRSS7Q7RTY8 843 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 ANKLE2Q86XL3 938 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 DDX42Q86XP3 938 aaKnown RBP eCLIP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 KSR1Q8IVT5 923 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 CCDC103Q8IW40 242 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 IFNL3Q8IZI9 196 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms