RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 STAT3P40763 770 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 CRHR2Q13324 411 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
SNX6-201ENST00000362031 SMCO2A6NFE2 343 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 M0R2N6 131 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 MMP1P03956 469 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNX6-201ENST00000362031 TAF1CQ15572 869 aaPredicted RBP12.39□□□□□ -0.43
SNX6-201ENST00000362031 UBE2SQ16763 222 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 FAM173BQ6P4H8 233 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 USP17L6PQ6QN14 398 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 SMCR8Q8TEV9 937 aaPredicted RBP12.39□□□□□ -0.43
SNX6-201ENST00000362031 PURBQ96QR8 312 aaKnown RBP12.39□□□□□ -0.43
SNX6-201ENST00000362031 MOV10L1Q9BXT6 1211 aaKnown RBP12.39□□□□□ -0.43
SNX6-201ENST00000362031 SPATC1LQ9H0A9 340 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 ZMYND12Q9H0C1 365 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 PORCNQ9H237 461 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 TMEM260Q9NX78 707 aa12.39□□□□□ -0.43
SNX6-201ENST00000362031 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
SNX6-201ENST00000362031 MEIS2O14770 477 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 BRD1O95696 1058 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
SNX6-201ENST00000362031 INHBEP58166 350 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 WASF1Q92558 559 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 TEX13BQ9BXU2 312 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 NLRP5P59047 1200 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 ERVK-9P63128 1117 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 ERVK-24P63145 666 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 CAP1Q01518 475 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
SNX6-201ENST00000362031 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
SNX6-201ENST00000362031 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
SNX6-201ENST00000362031 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 PARK7Q99497 189 aaKnown RBP12.38□□□□□ -0.43
SNX6-201ENST00000362031 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 SH3GLB2Q9NR46 395 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 RABGAP1Q9Y3P9 1069 aa12.38□□□□□ -0.43
SNX6-201ENST00000362031 H3BQV1 296 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 WNT7AO00755 349 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 TBC1D8O95759 1140 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 ERCC3P19447 782 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 OAZ1P54368 228 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 C17orf99Q6UX52 265 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 RNF146Q9NTX7 359 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 COL20A1Q9P218 1284 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
SNX6-201ENST00000362031 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
SNX6-201ENST00000362031 EDIL3O43854 480 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 TLR2O60603 784 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
SNX6-201ENST00000362031 FDX1P10109 184 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 BCRP11274 1271 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 PDCP20941 246 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 CTGFP29279 349 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 RESTQ13127 1097 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 MCTP1Q6DN14 999 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 RIC8AQ9NPQ8 531 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
SNX6-201ENST00000362031 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
SNX6-201ENST00000362031 DOCK3Q8IZD9 2030 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 ABCB11O95342 1321 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 ESYT2A0FGR8 921 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 TRPA1O75762 1119 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 CFBP00751 764 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 MAP2K2P36507 400 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
SNX6-201ENST00000362031 ADCY7P51828 1080 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 SLC30A10Q6XR72 485 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 BLIDQ8IZY5 108 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 GPRC5AQ8NFJ5 357 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 ZCCHC17Q9NP64 241 aaKnown RBP12.36□□□□□ -0.43
SNX6-201ENST00000362031 RNF186Q9NXI6 227 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 MORF4L1Q9UBU8 362 aa12.36□□□□□ -0.43
SNX6-201ENST00000362031 hCG_1984214I3L0E3 225 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 CA12O43570 354 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.431e-8■■□□□ 13.1
SNX6-201ENST00000362031 TRIM29Q14134 588 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 NCAPG2Q86XI2 1143 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 ZNF713Q8N859 430 aaPredicted RBP12.35□□□□□ -0.43
SNX6-201ENST00000362031 A1CFQ9NQ94 594 aaKnown RBP12.35□□□□□ -0.43
SNX6-201ENST00000362031 ASTN1O14525 1302 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 F13A1P00488 732 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 KRT2P35908 639 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
SNX6-201ENST00000362031 RPS6P62753 249 aaKnown RBP12.35□□□□□ -0.43
SNX6-201ENST00000362031 NBR1Q14596 966 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms