RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 NFU1Q9UMS0 254 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 LMTK2Q8IWU2 1503 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 A0A087WUV0 522 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-201ENST00000361866 CCDC172P0C7W6 258 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 KCNQ4P56696 695 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 ZBED6P86452 979 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 ARHGAP44Q17R89 818 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 MLXIPQ9HAP2 919 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 MTRF1LQ9UGC7 380 aaKnown RBP15.36■□□□□ 0.05
COL6A1-201ENST00000361866 PLCG1P19174 1290 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 NEK8Q86SG6 692 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 EFCAB13Q8IY85 973 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
COL6A1-201ENST00000361866 PRM3Q9NNZ6 103 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 CCDC87Q9NVE4 849 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 KCNJ6P48051 423 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 CALCOCO2Q13137 446 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 E2F5Q15329 346 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 TACO1Q9BSH4 297 aaKnown RBP15.35■□□□□ 0.05
COL6A1-201ENST00000361866 CLNS1AP54105 237 aaKnown RBP15.35■□□□□ 0.05
COL6A1-201ENST00000361866 SRLQ86TD4 932 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 MMS19Q96T76 1030 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.35■□□□□ 0.05
COL6A1-201ENST00000361866 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 FRMD3A2A2Y4 597 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 SPOPO43791 374 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 TNFAIP3P21580 790 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 MAGEA9P43362 315 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 KIF11P52732 1056 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 RPS8P62241 208 aaKnown RBP15.35■□□□□ 0.05
COL6A1-201ENST00000361866 EYA3Q99504 573 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 ADAMTS1Q9UHI8 967 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
COL6A1-201ENST00000361866 GSG1L2A8MUP6 293 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 NCK2O43639 380 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 STXBP4Q6ZWJ1 553 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 ENAHQ8N8S7 591 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 FBF1Q8TES7 1133 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 PNKPQ96T60 521 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 JPH2Q9BR39 696 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 FEZ2Q9UHY8 353 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 FAM184BQ9ULE4 1060 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 CEP170BQ9Y4F5 1589 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 PRPF3O43395 683 aaKnown RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 FLOT1O75955 427 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 EPB41P11171 864 aaKnown RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 RPL13P26373 211 aaKnown RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 IFNAR2P48551 515 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 ADCY7P51828 1080 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 EPHB4P54760 987 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 PLCB3Q01970 1234 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 ZNF804AQ7Z570 1209 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 CCDC50Q8IVM0 306 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 LRRC47Q8N1G4 583 aaKnown RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 IGDCC4Q8TDY8 1250 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 FAM169AQ9Y6X4 670 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-201ENST00000361866 A0A1B0GTH6 734 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 NR1I3Q14994 352 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 FUT8Q9BYC5 575 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 DISC1Q9NRI5 854 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 CTTNBP2NLQ9P2B4 639 aa15.34■□□□□ 0.05
COL6A1-201ENST00000361866 INO80Q9ULG1 1556 aaPredicted RBP15.33■□□□□ 0.05
COL6A1-201ENST00000361866 A6NNZ2 444 aa15.33■□□□□ 0.05
COL6A1-201ENST00000361866 CYP2D6P10635 497 aa15.33■□□□□ 0.05
COL6A1-201ENST00000361866 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.05
COL6A1-201ENST00000361866 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.05
COL6A1-201ENST00000361866 NFRKBQ6P4R8 1299 aa15.33■□□□□ 0.05
COL6A1-201ENST00000361866 ILDR1Q86SU0 546 aaPredicted RBP15.33■□□□□ 0.05
COL6A1-201ENST00000361866 ADD3Q9UEY8 706 aaKnown RBP15.33■□□□□ 0.05
COL6A1-201ENST00000361866 PCDHA13Q9Y5I0 950 aa15.33■□□□□ 0.05
COL6A1-201ENST00000361866 USP17L3A6NCW0 530 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 USP17L4A6NCW7 530 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 DDAH1O94760 285 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 CCNE1P24864 410 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 VWA3BQ502W6 1294 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 FAM26FQ5R3K3 315 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 GSTA5Q7RTV2 222 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 USP17L1Q7RTZ2 530 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.04
COL6A1-201ENST00000361866 KANSL2Q9H9L4 492 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 TSKSQ9UJT2 592 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 PCDHA12Q9UN75 941 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 GCNT3O95395 438 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 TADA2BQ86TJ2 420 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 HOOK3Q86VS8 718 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
COL6A1-201ENST00000361866 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL6A1-201ENST00000361866 HPS3Q969F9 1004 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 TCHHQ07283 1943 aa15.33■□□□□ 0.04
COL6A1-201ENST00000361866 TNIP1Q15025 636 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 CCDC6Q16204 474 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 ICE2Q659A1 982 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 CCDC174Q6PII3 467 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 GPBP1Q86WP2 473 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 CACNA2D3Q8IZS8 1091 aa15.32■□□□□ 0.04
COL6A1-201ENST00000361866 TBC1D31Q96DN5 1066 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms