RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 ANKFY1Q9P2R3 1169 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 HGSO14964 777 aaPredicted RBP23.17■■□□□ 1.3
SMURF1-201ENST00000361125 POLGP54098 1239 aaPredicted RBP23.17■■□□□ 1.3
SMURF1-201ENST00000361125 SPOUT1Q5T280 376 aaKnown RBP23.17■■□□□ 1.3
SMURF1-201ENST00000361125 AMNQ9BXJ7 453 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 SAR1BQ9Y6B6 198 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 SPATA1Q5VX52 437 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 CCDC127Q96BQ5 260 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 IQCDQ96DY2 449 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.17■■□□□ 1.3
SMURF1-201ENST00000361125 COL4A3BPQ9Y5P4 624 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 MAP3K4Q9Y6R4 1608 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 PSDA5PKW4 1024 aaPredicted RBP23.17■■□□□ 1.3
SMURF1-201ENST00000361125 ERVV-1B6SEH8 477 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 PAK2Q13177 524 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 TBC1D10BQ4KMP7 808 aaPredicted RBP23.17■■□□□ 1.3
SMURF1-201ENST00000361125 KRT27Q7Z3Y8 459 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 ATG3Q9NT62 314 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 ABCC3O15438 1527 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 CNGA1P29973 690 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 GABPAQ06546 454 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 B4GALNT4Q76KP1 1039 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 CCDC89Q8N998 374 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 KCNG1Q9UIX4 513 aa23.17■■□□□ 1.3
SMURF1-201ENST00000361125 SH2B2O14492 632 aaPredicted RBP23.16■■□□□ 1.3
SMURF1-201ENST00000361125 NDUFAB1O14561 156 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 KCNK3O14649 394 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 PTPN21Q16825 1174 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 FAM26FQ5R3K3 315 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 RNF26Q9BY78 433 aaPredicted RBP23.16■■□□□ 1.3
SMURF1-201ENST00000361125 CACNB1Q02641 598 aaPredicted RBP23.16■■□□□ 1.3
SMURF1-201ENST00000361125 SF3A3Q12874 501 aaKnown RBP eCLIP23.16■■□□□ 1.3
SMURF1-201ENST00000361125 DIXDC1Q155Q3 683 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 SMYD4Q8IYR2 804 aaPredicted RBP23.16■■□□□ 1.3
SMURF1-201ENST00000361125 GJA10Q969M2 543 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 LRRIQ4A6NIV6 560 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 YWHAEP62258 255 aaKnown RBP23.16■■□□□ 1.3
SMURF1-201ENST00000361125 MECOMQ03112 1051 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 WHAMMP3Q1A5X7 153 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 GRAMD1CQ8IYS0 662 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 SMC1BQ8NDV3 1235 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 SLC5A4Q9NY91 659 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 SLC39A14Q15043 492 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 HLFQ16534 295 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 LRCH2Q5VUJ6 765 aa23.16■■□□□ 1.3
SMURF1-201ENST00000361125 CACTINQ8WUQ7 758 aaKnown RBP23.16■■□□□ 1.3
SMURF1-201ENST00000361125 KRT26Q7Z3Y9 468 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 SESTD1Q86VW0 696 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 COA7Q96BR5 231 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 PPP6R2O75170 966 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 TBC1D8O95759 1140 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 TNNC2P02585 160 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 A0A087WWV3 80 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 RAD17O75943 681 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 PABPC4Q13310 644 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMURF1-201ENST00000361125 PI4K2BQ8TCG2 481 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 CCT6BQ92526 530 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 BBOX1O75936 387 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 GOLGA8FQ08AF8 430 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 GOLGA8DPQ0D2H9 430 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 FYB2Q5VWT5 728 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 GOLGA5Q8TBA6 731 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 ZNF577Q9BSK1 485 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 GUCY2FP51841 1108 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 SCYL2Q6P3W7 929 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 C1orf112Q9NSG2 853 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 CDC42BPGQ6DT37 1551 aa23.15■■□□□ 1.3
SMURF1-201ENST00000361125 CPSF1Q10570 1443 aaKnown RBP23.14■■□□□ 1.3
SMURF1-201ENST00000361125 RASGRF1Q13972 1273 aa23.14■■□□□ 1.3
SMURF1-201ENST00000361125 HSPA1LP34931 641 aa23.14■■□□□ 1.3
SMURF1-201ENST00000361125 CCDC17Q96LX7 622 aa23.14■■□□□ 1.3
SMURF1-201ENST00000361125 ZSWIM5Q9P217 1185 aa23.14■■□□□ 1.3
SMURF1-201ENST00000361125 SEPT9Q9UHD8 586 aaPredicted RBP23.14■■□□□ 1.3
SMURF1-201ENST00000361125 ANAPC4Q9UJX5 808 aa23.14■■□□□ 1.3
SMURF1-201ENST00000361125 RXRBP28702 533 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 NR5A1Q13285 461 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 PPM1KQ8N3J5 372 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 CNOT6LQ96LI5 555 aaKnown RBP23.14■■□□□ 1.29
SMURF1-201ENST00000361125 PDE6CP51160 858 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 GPATCH4Q5T3I0 446 aaKnown RBP23.14■■□□□ 1.29
SMURF1-201ENST00000361125 BSPRYQ5W0U4 402 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 USP17L2Q6R6M4 530 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 TBCKQ8TEA7 893 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 TET3O43151 1660 aa23.14■■□□□ 1.29
SMURF1-201ENST00000361125 VPS37BQ9H9H4 285 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 PALLDQ8WX93 1383 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 USP17L3A6NCW0 530 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 USP17L4A6NCW7 530 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 COPB1P53618 953 aaKnown RBP23.13■■□□□ 1.29
SMURF1-201ENST00000361125 LRRC41Q15345 812 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 USP17L1Q7RTZ2 530 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 TRIM58Q8NG06 486 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 PCDHA5Q9Y5H7 936 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 PPP2R5CQ13362 524 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 SLFNL1Q499Z3 407 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 ADAT2Q7Z6V5 191 aaKnown RBP23.13■■□□□ 1.29
SMURF1-201ENST00000361125 WDR70Q9NW82 654 aa23.13■■□□□ 1.29
SMURF1-201ENST00000361125 ODR4Q5SWX8 454 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms