RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 GPATCH4Q5T3I0 446 aaKnown RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 NXNQ6DKJ4 435 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 KDRP35968 1356 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 SART1O43290 800 aaKnown RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 ANKRD36BP1Q96IX9 119 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ALCAMQ13740 583 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 SLC13A4Q9UKG4 626 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ALAS1P13196 640 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 PARD3BQ8TEW8 1205 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 CBX8Q9HC52 389 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ZHX1Q9UKY1 873 aaPredicted RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 CTDSPL2Q05D32 466 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 SGSM2O43147 1006 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ARMC9Q7Z3E5 817 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ZNF215Q9UL58 517 aaPredicted RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 HYOU1Q9Y4L1 999 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 MED23Q9ULK4 1368 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 PLEKHG3A1L390 1219 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 PMLP29590 882 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ANKRD20A4Q4UJ75 823 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ANKRD20A8PQ5CZ79 823 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ANKRD20A2Q5SQ80 823 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ANKRD20A1Q5TYW2 823 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 NOSTRINQ8IVI9 506 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 DACT3Q96B18 629 aaPredicted RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 CHL1O00533 1208 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 MCF2LO15068 1137 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 NVLO15381 856 aaKnown RBP10.55□□□□□ -0.72
CUX1-203ENST00000360264 INHBAP08476 426 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 IFNA8P32881 189 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 PHEXP78562 749 aa10.55□□□□□ -0.72
CUX1-203ENST00000360264 ZMYM6O95789 1325 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 GCFC2P16383 781 aaKnown RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 C2CD5Q86YS7 1000 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 HSPA6P17066 643 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 MYO1EQ12965 1108 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 NLRP7Q8WX94 980 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 NEURL1BA8MQ27 555 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 KCNJ18B7U540 433 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 SUN1O94901 812 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 DLATP10515 647 aaKnown RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 KCNJ12Q14500 433 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 TUBB6Q9BUF5 446 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ZNF189O75820 626 aaPredicted RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 TMC4Q7Z404 712 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 MYL7Q01449 175 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ANKRD42Q8N9B4 389 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 AP5M1Q9H0R1 490 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 MAD1L1Q9Y6D9 718 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ADGBQ8N7X0 1667 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 TSPOAP1O95153 1857 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 HIP1RO75146 1068 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 PTK2Q05397 1052 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 BEND3Q5T5X7 828 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 USP21Q9UK80 565 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 PPP1R9AQ9ULJ8 1098 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ATP10DQ9P241 1426 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 SMIM24O75264 130 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 C8orf34Q49A92 452 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 MRRFQ96E11 262 aaKnown RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 EDEM3Q9BZQ6 932 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 EFCC1Q9HA90 598 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 POLGP54098 1239 aaPredicted RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 KRT40Q6A162 431 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 BLIDQ8IZY5 108 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ERBB4Q15303 1308 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 CFAP43Q8NDM7 1665 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 SLC7A3Q8WY07 619 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ZMYM3Q14202 1370 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 IL9RQ01113 521 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ANXA13P27216 316 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 ADD3Q9UEY8 706 aaKnown RBP10.54□□□□□ -0.72
CUX1-203ENST00000360264 PNMA3Q9UL41 463 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 CFAP74Q9C0B2 1584 aa10.54□□□□□ -0.72
CUX1-203ENST00000360264 PHLPP2Q6ZVD8 1323 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 GABPB1Q06547 395 aaPredicted RBP10.53□□□□□ -0.72
CUX1-203ENST00000360264 SUPT20HL1Q3ZLR7 823 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 NLGN1Q8N2Q7 840 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 RABEP2Q9H5N1 569 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 HAUS4Q9H6D7 363 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 JRKLQ9Y4A0 524 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ANGPTL3Q9Y5C1 460 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 APC2O95996 2303 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
CUX1-203ENST00000360264 SCYL2Q6P3W7 929 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 PHKBQ93100 1093 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 CARD6Q9BX69 1037 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 hCG_1984214I3L0E3 225 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ARMCX5Q6P1M9 558 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ATP6V1E2Q96A05 226 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 FAM149B1Q96BN6 582 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 MRPL47Q9HD33 250 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms