RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 A6NJR5 290 aa12.21□□□□□ -0.46
COL11A1-202ENST00000358392 ZBTB24O43167 697 aaPredicted RBP12.21□□□□□ -0.46
COL11A1-202ENST00000358392 N4BP2L2Q92802 583 aaPredicted RBP12.21□□□□□ -0.46
COL11A1-202ENST00000358392 APPBP2Q92624 585 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 TRIP13Q15645 432 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-202ENST00000358392 NLRX1Q86UT6 975 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 REXO1Q8N1G1 1221 aaKnown RBP12.2□□□□□ -0.46
COL11A1-202ENST00000358392 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 IPO11Q9UI26 975 aaKnown RBP12.2□□□□□ -0.46
COL11A1-202ENST00000358392 GGA1Q9UJY5 639 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 PLCH2O75038 1416 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 IL2RBP14784 551 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 STX1BP61266 288 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 ESRRGP62508 458 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 E2F4Q16254 413 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-202ENST00000358392 HIPK4Q8NE63 616 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.46
COL11A1-202ENST00000358392 ZNF277Q9NRM2 450 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-202ENST00000358392 EFCAB8A8MWE9 144 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 ZAP70P43403 619 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 TFAP4Q01664 338 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 ME3Q16798 604 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 TRAPPC3LQ5T215 181 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 ZNF449Q6P9G9 518 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 PHACTR3Q96KR7 559 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 MLXIPQ9HAP2 919 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 FANCLQ9NW38 375 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 E7EWF7 191 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 MAP3K7O43318 606 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 ANGPTL8Q6UXH0 198 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
COL11A1-202ENST00000358392 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
COL11A1-202ENST00000358392 EIF4E1BA6NMX2 242 aaKnown RBP12.19□□□□□ -0.46
COL11A1-202ENST00000358392 LMNB1P20700 586 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 ATP6V1E1P36543 226 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 HSP90AA5PQ58FG0 334 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-202ENST00000358392 ACTN1P12814 892 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 CDKL2Q92772 493 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 SUCLA2Q9P2R7 463 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-202ENST00000358392 GOLGA8HP0CJ92 632 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 CEP70Q8NHQ1 597 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 PPP1R13BQ96KQ4 1090 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 MAML1Q92585 1016 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 SYNDIG1LA6NDD5 238 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 H3BRJ5 948 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 ART3Q13508 389 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 KRT80Q6KB66 452 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 TRIM59Q8IWR1 403 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 EXT2Q93063 718 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 CAPN11Q9UMQ6 739 aa12.19□□□□□ -0.46
COL11A1-202ENST00000358392 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 RPGRIP1Q96KN7 1286 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 KIAA1468Q9P260 1216 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 NRBP1Q9UHY1 535 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 KDM3AQ9Y4C1 1321 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 NOP14P78316 857 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 LRRC47Q8N1G4 583 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 SLC35F6Q8N357 371 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 MAGOHBQ96A72 148 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 SCOCQ9UIL1 159 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 SLC7A5Q01650 507 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 SPATS2Q86XZ4 545 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 EDC3Q96F86 508 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 DDX25Q9UHL0 483 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 PFDN6O15212 129 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 EVI5O60447 810 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 CPP00450 1065 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 SH3BGRP55822 239 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 EYA2O00167 538 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 RPN1P04843 607 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 CCNYQ8ND76 341 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 MYL7Q01449 175 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 FAM193BQ96PV7 902 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 DRC3Q9H069 523 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 DNAJC17Q9NVM6 304 aaKnown RBP12.18□□□□□ -0.46
COL11A1-202ENST00000358392 CLIC4Q9Y696 253 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 SNAPC4Q5SXM2 1469 aa12.18□□□□□ -0.46
COL11A1-202ENST00000358392 NDUFA8P51970 172 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 DAB2P98082 770 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 EAPPQ56P03 285 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-202ENST00000358392 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 LRRIQ4A6NIV6 560 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 PLTPP55058 493 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 KLHL29Q96CT2 875 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms