RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 GNAQP50148 359 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 SRGAP1Q7Z6B7 1085 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 IRF2BP1Q8IU81 584 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 SMCR8Q8TEV9 937 aaPredicted RBP9.26□□□□□ -0.93
CD46-205ENST00000358170 PNKPQ96T60 521 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 TRIM34Q9BYJ4 488 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 C6orf50Q9HD87 102 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 ZNHIT6Q9NWK9 470 aaKnown RBP9.26□□□□□ -0.93
CD46-205ENST00000358170 STXBP3O00186 592 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 OR52Z1P0C646 297 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 TM4SF1P30408 202 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 TRAPPC10P48553 1259 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 CACNB3P54284 484 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 TCP10Q12799 353 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 MB21D1Q8N884 522 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 C4orf32Q8N8J7 132 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 DEF6Q9H4E7 631 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 PDE11AQ9HCR9 933 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 CD209Q9NNX6 404 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 H7C1D1 291 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 ZBTB22O15209 634 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 NDUFA10O95299 355 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 TDP2O95551 362 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 PCP11498 1178 aaKnown RBP9.26□□□□□ -0.93
CD46-205ENST00000358170 SNAP25P60880 206 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 PPARDQ03181 441 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 GRM4Q14833 912 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 SLC10A5Q5PT55 438 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 DPP8Q6V1X1 898 aaPredicted RBP9.26□□□□□ -0.93
CD46-205ENST00000358170 ELOA2Q8IYF1 753 aaPredicted RBP9.26□□□□□ -0.93
CD46-205ENST00000358170 ADSSL1Q8N142 457 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 ABCB6Q9NP58 842 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 VPS18Q9P253 973 aa9.26□□□□□ -0.93
CD46-205ENST00000358170 XIRP1Q702N8 1843 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 N4BP1O75113 896 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 KIF20AO95235 890 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 PLEKP08567 350 aaPredicted RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 RBM5P52756 815 aaKnown RBP eCLIP9.25□□□□□ -0.934e-21■■■■□ 19.4
CD46-205ENST00000358170 KCTD19Q17RG1 926 aaPredicted RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 SBK1Q52WX2 424 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 TTBK2Q6IQ55 1244 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 ZSCAN29Q8IWY8 852 aaPredicted RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 REXO1Q8N1G1 1221 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 CCDC155Q8N6L0 562 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 CALML4Q96GE6 196 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 CNOT6LQ96LI5 555 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 CRACR2AQ9BSW2 395 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 LRWD1Q9UFC0 647 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 LIMA1Q9UHB6 759 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 TTF2Q9UNY4 1162 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 UBAP1LF5GYI3 381 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 ZNF185O15231 689 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 FGRP09769 529 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 PBX1P40424 430 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 GSTO1P78417 241 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 IKQ13123 557 aaPredicted RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 GRAPQ13588 217 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 PTPROQ16827 1216 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 KCTD1Q719H9 257 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 NEK8Q86SG6 692 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 NELFCDQ8IXH7 590 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 GSPT2Q8IYD1 628 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 GRAPLQ8TC17 118 aaPredicted RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
CD46-205ENST00000358170 GGA1Q9UJY5 639 aa9.25□□□□□ -0.93
CD46-205ENST00000358170 ZRANB2O95218 330 aaKnown RBP eCLIP9.24□□□□□ -0.932e-7■■■□□ 16.1
CD46-205ENST00000358170 CXCR5P32302 372 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 VSNL1P62760 191 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 MEX3CQ5U5Q3 659 aaKnown RBP9.24□□□□□ -0.93
CD46-205ENST00000358170 ARL6IP4Q66PJ3 421 aaKnown RBP9.24□□□□□ -0.93
CD46-205ENST00000358170 C2CD5Q86YS7 1000 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 GLIS3Q8NEA6 775 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 LACRTQ9GZZ8 138 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 NLRC4Q9NPP4 1024 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 USP21Q9UK80 565 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 MYO6Q9UM54 1294 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 MYH6P13533 1939 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 PAPPAQ13219 1627 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 ATP1A1P05023 1023 aaKnown RBP9.24□□□□□ -0.93
CD46-205ENST00000358170 GNA11P29992 359 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 RNASE9P60153 205 aaKnown RBP9.24□□□□□ -0.93
CD46-205ENST00000358170 CALCRLQ16602 461 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 CEP112Q8N8E3 955 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 NUDT12Q9BQG2 462 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 CICQ96RK0 1608 aaPredicted RBP9.24□□□□□ -0.93
CD46-205ENST00000358170 NID2Q14112 1375 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 RSRC2Q7L4I2 434 aaKnown RBP9.24□□□□□ -0.93
CD46-205ENST00000358170 SNX29Q8TEQ0 813 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 P2RX5Q93086 422 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 JAKMIP2Q96AA8 810 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 CCDC42Q96M95 316 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 TRIM9Q9C026 710 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 ZNF287Q9HBT7 754 aa9.24□□□□□ -0.93
CD46-205ENST00000358170 LGALS16A8MUM7 142 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 AKR1B10O60218 316 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 AKR1B1P15121 316 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms