RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 ATP5JP18859 108 aa18.95■□□□□ 0.62
IFT20-202ENST00000357896 RASA1P20936 1047 aa18.95■□□□□ 0.62
IFT20-202ENST00000357896 SBK1Q52WX2 424 aa18.95■□□□□ 0.62
IFT20-202ENST00000357896 HAUS7Q99871 368 aa18.95■□□□□ 0.62
IFT20-202ENST00000357896 ZNF287Q9HBT7 754 aa18.95■□□□□ 0.62
IFT20-202ENST00000357896 HOMER2Q9NSB8 354 aa18.95■□□□□ 0.62
IFT20-202ENST00000357896 GBF1Q92538 1859 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 TLL1O43897 1013 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 ACTN1P12814 892 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 SMPD1P17405 629 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 GIMAP6Q6P9H5 292 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
IFT20-202ENST00000357896 HLA-CQ95604 372 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 SCLYQ96I15 445 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 ALDH8A1Q9H2A2 487 aaPredicted RBP18.94■□□□□ 0.62
IFT20-202ENST00000357896 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
IFT20-202ENST00000357896 GPR37L1O60883 481 aa18.93■□□□□ 0.62
IFT20-202ENST00000357896 GMCL1P1Q8NEA9 526 aa18.93■□□□□ 0.62
IFT20-202ENST00000357896 PHOSPHO2Q8TCD6 241 aa18.93■□□□□ 0.62
IFT20-202ENST00000357896 SLC9A7Q96T83 725 aa18.93■□□□□ 0.62
IFT20-202ENST00000357896 PUS7LQ9H0K6 701 aaKnown RBP18.93■□□□□ 0.62
IFT20-202ENST00000357896 BCL11AQ9H165 835 aa18.93■□□□□ 0.62
IFT20-202ENST00000357896 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 KIF28PB7ZC32 967 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 RFXAPO00287 272 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 RAB11FIP3O75154 756 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 HMMRO75330 724 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 TTLL1O95922 423 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 BMP3P12645 472 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 PSMC6P62333 389 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 TTLL4Q14679 1199 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 TKFCQ3LXA3 575 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 ZNF444Q8N0Y2 327 aaPredicted RBP18.92■□□□□ 0.62
IFT20-202ENST00000357896 VWCEQ96DN2 955 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 A1CFQ9NQ94 594 aaKnown RBP18.92■□□□□ 0.62
IFT20-202ENST00000357896 MCM3APO60318 1980 aa18.92■□□□□ 0.62
IFT20-202ENST00000357896 IGKV6D-41A0A0C4DH26 115 aa18.91■□□□□ 0.62
IFT20-202ENST00000357896 MINDY4BA8MYZ0 360 aa18.91■□□□□ 0.62
IFT20-202ENST00000357896 RFC2P35250 354 aa18.91■□□□□ 0.62
IFT20-202ENST00000357896 CHURC1Q8WUH1 139 aa18.91■□□□□ 0.62
IFT20-202ENST00000357896 STRBPQ96SI9 672 aaKnown RBP18.91■□□□□ 0.62
IFT20-202ENST00000357896 CERS4Q9HA82 394 aa18.91■□□□□ 0.62
IFT20-202ENST00000357896 RNF146Q9NTX7 359 aa18.91■□□□□ 0.62
IFT20-202ENST00000357896 MTMR4Q9NYA4 1195 aa18.91■□□□□ 0.62
IFT20-202ENST00000357896 GREB1LQ9C091 1923 aaPredicted RBP18.91■□□□□ 0.62
IFT20-202ENST00000357896 CHGBP05060 677 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 STAT2P52630 851 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 SLFN13Q68D06 897 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 TAPT1Q6NXT6 567 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 DEFB128Q7Z7B8 93 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 STK11IPQ8N1F8 1099 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 ARNTL2Q8WYA1 636 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 CEP95Q96GE4 821 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 TRERF1Q96PN7 1200 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 VTA1Q9NP79 307 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 POLR3EQ9NVU0 708 aa18.9■□□□□ 0.62
IFT20-202ENST00000357896 PRRC2BQ5JSZ5 2229 aaKnown RBP18.89■□□□□ 0.61
IFT20-202ENST00000357896 GSG1L2A8MUP6 293 aa18.89■□□□□ 0.61
IFT20-202ENST00000357896 TMEM232C9JQI7 657 aa18.89■□□□□ 0.61
IFT20-202ENST00000357896 TAP1Q03518 808 aa18.89■□□□□ 0.61
IFT20-202ENST00000357896 FAM160B2Q86V87 743 aa18.89■□□□□ 0.61
IFT20-202ENST00000357896 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.61
IFT20-202ENST00000357896 TRMT13Q9NUP7 481 aaKnown RBP18.89■□□□□ 0.61
IFT20-202ENST00000357896 ISY1Q9ULR0 285 aaKnown RBP18.89■□□□□ 0.61
IFT20-202ENST00000357896 TNKSO95271 1327 aa18.89■□□□□ 0.61
IFT20-202ENST00000357896 CYP2C9P11712 490 aa18.88■□□□□ 0.61
IFT20-202ENST00000357896 IKQ13123 557 aaPredicted RBP18.88■□□□□ 0.61
IFT20-202ENST00000357896 DUSP28Q4G0W2 176 aa18.88■□□□□ 0.61
IFT20-202ENST00000357896 KIAA1211Q6ZU35 1233 aa18.88■□□□□ 0.61
IFT20-202ENST00000357896 EEPD1Q7L9B9 569 aa18.88■□□□□ 0.61
IFT20-202ENST00000357896 HERC6Q8IVU3 1022 aa18.88■□□□□ 0.61
IFT20-202ENST00000357896 FBXO16Q8IX29 292 aaPredicted RBP18.88■□□□□ 0.61
IFT20-202ENST00000357896 LRRC47Q8N1G4 583 aaKnown RBP18.88■□□□□ 0.61
IFT20-202ENST00000357896 GPHNQ9NQX3 736 aaPredicted RBP18.88■□□□□ 0.61
IFT20-202ENST00000357896 EPOPA6NHQ4 379 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 CCER2I3L3R5 266 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 PITPNM1O00562 1244 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 ZNF536O15090 1300 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 ALAS1P13196 640 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 CPT1AP50416 773 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 KRT40Q6A162 431 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 RETREG2Q8NC44 543 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 STAG1Q8WVM7 1258 aa18.87■□□□□ 0.61
IFT20-202ENST00000357896 PI4K2BG5E9Z4 385 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 PLA2G6O60733 806 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 PTGS1P23219 599 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 SLC1A4P43007 532 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 PURAQ00577 322 aaKnown RBP18.86■□□□□ 0.61
IFT20-202ENST00000357896 BRDTQ58F21 947 aaPredicted RBP18.86■□□□□ 0.61
IFT20-202ENST00000357896 MORC4Q8TE76 937 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 GMCL1Q96IK5 515 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 MTG1Q9BT17 334 aaPredicted RBP18.86■□□□□ 0.61
IFT20-202ENST00000357896 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.61
IFT20-202ENST00000357896 C11orf16Q9NQ32 467 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 CYP39A1Q9NYL5 469 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 LMCD1Q9NZU5 365 aa18.86■□□□□ 0.61
IFT20-202ENST00000357896 PRDM1O75626 825 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 BAIAP3O94812 1187 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 IQCF3P0C7M6 154 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms